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Clear Filters
Annotation type
  • 4chromatin state
  • 1accessible chromatin
  • 1target gene predictions
Annotation Category
  • 5cis-regulatory elements
  • 1Target gene links
Annotation type Category
  • 4ChIP-seq
  • 2DNase-seq
Available data
  • 4bed bed9
  • 2bed bed3+
  • 2bigBed bed9
  • 1bigWig
File set status
  • 6released
Genome assembly (visualization)
  • 21hg19
  • 6GRCh38
Organism
  • 6Homo sapiens
Biosample type
  • 5primary cell
  • 1tissue
Biosample term
  • 5endothelial cell of umbilical vein
  • 1posterior vena cava
Organ
  • 574blood
  • 570brain
  • 235epithelium
  • 212heart
  • 209lung
  • 192kidney
  • 148intestine
  • 139skin of body
  • 128connective tissue
  • 115liver
  • 111muscle organ
  • 100musculature of body
  • 95large intestine
  • 87blood vessel
  • 87vasculature
  • 80embryo
  • 79pancreas
  • 78limb
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  • 68uterus
  • 65extraembryonic component
  • 56thymus
  • 54adrenal gland
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  • 53bodily fluid
  • 43placenta
  • 38bone element
  • 37mammary gland
  • 37small intestine
  • 37spleen
  • 33artery
  • 31thyroid gland
  • 27adipose tissue
  • 27gonad
  • 25ureter
  • 23prostate gland
  • 19spinal cord
  • 17esophagus
  • 16ovary
  • 15skeleton
  • 11nerve
  • 11testis
  • 10penis
  • 8lymph node
  • 7mouth
  • 6lymphoid tissue
  • 6vein
  • 5breast
  • 5lymphatic vessel
  • 5urinary bladder
  • 5vagina
  • 4bronchus
  • 4tongue
  • 2bone marrow
  • 1embryonic structure
  • 1gallbladder
  • 1nose
  • 1pituitary gland
Life stage
  • 3newborn
Date released
  • 2January, 2020
  • 2September, 2022
  • 1July, 2026
  • 1May, 2020
Software used
  • 4chromhmm
Lab
  • 6AMP-T2D consortium
Project
  • 6AMP
Collection Tags
  • 2EpiMap
  • 1DGA
  • 1ENCODE-rE2G
RFA
  • 6AMP

Showing 6 of 6 results

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  • FileSet

    DSR995929

    released

    Annotation file set: Target gene predictions for posterior vena cava (UBERON:0001072) derived from ENCODE-rE2G (ENCSR321IYW).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR660JUZ

    released

    Annotation file set: Chromatin states for BSS00298 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR550HDB

    released

    Annotation file set: Chromatin states for BSS00296 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR603NLX

    released

    Annotation file set: Accessible chromatin of endothelial cell of umbilical vein ENCODE DHSseq
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR214PMG

    released

    Annotation file set: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR772SPX

    released

    Annotation file set: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
    Lab: AMP-T2D consortium
    Project: AMP
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