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Assay category
1
DNA accessibility
1
DNA binding
Assay
1
ChIP-seq
1
DNase-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
14
hg19
GRCh38
Organism
2
Homo sapiens
Target of assay
1
RNA binding protein
1
transcription factor
Biosample type
2
primary cell
Life stage
2
unknown
Available data
4
bam
4
bigWig
4
fastq
3
bed narrowPeak
3
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign
Platform
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIe
1
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2000
Run type
2
single-ended
1
paired-ended
Read length (nt)
2
36
1
101
Library made from
2
DNA
Date released
2
August, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
assembly!
GRCh38
lab.title!
Klaus Kaestner, Upenn
Showing 2 of 2 results
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Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132965
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP