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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
33
fibroblast
28
adipocyte
28
adipose tissue
24
pericyte cell
19
foreskin fibroblast
19
mesenchymal stem cell
17
fibroblast of cardiac tissue
16
fibroblast of lung
16
testis
15
omental fat pad
15
osteoblast
13
subcutaneous adipose tissue
12
fibroblast of dermis
12
skin fibroblast
10
hepatic stellate cell
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
7
GM23248
7
chondrocyte
6
NT2-D1 cell
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
cartilage tissue
5
fibroblast of peridontal ligament
5
fibroblast of the conjunctiva
5
pancreatic stellate cell
4
HT1080
4
brain pericyte
4
cardiac fibroblast
4
fibroblast of gingiva
4
fibroblast of the aortic adventitia
4
preadipocyte
4
stromal cell of bone marrow
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pulmonary interstitial fibroblast
2
adipose tissue derived mesenchymal stem cell
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
luteal cell
2
mesangial cell
2
stromal cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
NT2/D1
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
adult endothelial progenitor cell
1
beige adipocyte
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fat cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
white adipose cell
1
white adipose tissue
Disease term
3
fibrosarcoma
Organ
4
connective tissue
0
testis
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
bodily fluid
Showing 4 of 4 results
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Download
FileSet
DSR838AAN
released
Annotation file set
: Candidate regulatory elements for BSS00709 HT1080 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR810CKU
released
Annotation file set
: Target gene predictions for BSS00709 HT1080 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR488OIF
released
Annotation file set
: Chromatin states for BSS00709 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR542MAT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HT1080
Lab:
AMP-T2D consortium
Project:
AMP