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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
1
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
22
stomach
20
breast cancer cell
20
heart
18
kidney
17
brain
17
lung
17
muscle of arm
15
large intestine
15
muscle of back
15
placenta
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
small intestine
13
left lung
13
muscle of leg
12
neuroblastoma cell
11
gastric cancer cell
11
hematopoietic multipotent progenitor cell
10
cardiac muscle cell
10
diffuse intrinsic pontine glioma
10
foreskin fibroblast
10
renal cortex interstitium
10
right lung
10
thymus
9
MCF-7
9
Rhabdomyosarcoma
9
foreskin keratinocyte
9
left kidney
9
liposarcoma
9
liver
9
mammary epithelial cell
9
renal pelvis
9
spinal cord
8
CD4-positive, alpha-beta T cell
8
T-cell acute lymphoblastic leukemia
8
esophageal adenocarcinoma
8
keratinocyte
8
neuronal stem cell
8
right kidney
8
spleen
7
B cell
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta T cell
7
fibroblast cell line
7
hESC cell
7
heart left ventricle
6
A549
6
Chondroid Chordoma
6
H9
6
acute myeloid leukemia
6
bronchial epithelial cell
6
endothelial cell of umbilical vein
6
neuroblastoma cell line
6
osteoblast
5
CD4-positive, alpha-beta memory T cell
5
Ewing sarcoma
5
HEK293
5
HepG2
5
embryonic stem cell
5
esophageal squamous cell carcinoma
5
fibroblast of lung
5
foreskin melanocyte
5
glioblastoma multiforme cancer stem cell
5
natural killer cell
5
neural progenitor cell
5
osteosarcoma
5
prostate cancer cell line
5
testis
4
22Rv1
4
CD14-positive monocyte
4
GM06990
4
GM12864
4
GM12865
4
GM12873
4
GM12875
4
GM12878
4
HL-60
4
HS-SY-2 cell
4
IMR-90
4
Jurkat
4
K562
4
LNCAP
4
Mantle cell lymphoma
4
Peyer's patch
4
RS4-11 cell
4
Rh-4 cell
4
SK-N-MC
4
T-cell
4
Th1 cell
4
Tumor-derived cell line
4
WERI-Rb-1
4
WI38
4
adipocyte
4
body of pancreas
4
cardiac fibroblast
4
chorionic villus
4
choroid plexus epithelial cell
4
colon adenocarcinoma
4
dermal fibroblast
4
dermis blood vessel endothelial cell
4
diffuse large B-cell lymphoma
4
endothelial cell
4
erythroid progenitor cell
4
esophagus squamous epithelium
4
fibroblast
4
fibroblast of mammary gland
4
fibroblast of villous mesenchyme
4
gastroesophageal sphincter
4
glioblastoma cell
4
glioma cell
4
immortal neural cell line cell
4
layer of hippocampus
4
left renal pelvis
4
lower leg skin
4
lymphoblastoid cell line
4
pancreas
4
right renal pelvis
4
sigmoid colon
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
4
upper lobe of left lung
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
B-lymphocyte
3
BE(2)-C
3
BJ cell
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
COLO205
3
Caco-2 cell
3
DND-41 cell
3
GM08714
3
GM10847
3
GM12801
3
GM12872
3
GM12874
3
GM12891
3
GM12892
3
GM18505
3
GM18526
3
GM18951
3
GM19099
3
GM19193
3
GM19238
3
GM19239
3
GM19240
3
GM23248
3
H1-hESC
3
HAC cell
3
HAP-1
3
HBMEC cell
3
HCT-116 cell
3
HEK293-T-REx cell
3
HT-29
3
HeLa-S3
3
Ishikawa
3
LHCN-M2
3
MCF 10A
3
MG63
3
MM.1S
3
NHEK
3
NT2-D1 cell
3
Normal Human Astrocytes
3
OCI-LY1
3
OCI-LY7
3
PANC-1 cell
3
PC-3
3
PC-9
3
RKO
3
RPMI8226
3
RWPE1
3
Raji cell
3
SAEC
3
SH-SY5Y cell
3
SK-N-DZ
3
SK-N-SH
3
SK-N-SH_RA
3
SW480
3
T-47D cell
3
T-helper 1 cell
3
U-87 MG
3
U2OS
3
WI-38 cell
3
aortic adventitial fibroblast
3
breast epithelium
3
caudate nucleus
3
chronic lymphocytic leukemia cell
3
colonic mucosa
3
dermis microvascular lymphatic vessel endothelial cell
3
endocrine pancreas
3
endodermal cell
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
fibroblast of pulmonary artery
Organ
4
lung
Life stage
1
embryonic
Date released
3
February, 2021
3
September, 2022
1
June, 2020
1
May, 2021
1
October, 2022
Software used
2
macs
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR195QHJ
released
Annotation file set
: Binding sites annotation for IMR-90 (IMR90) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR249FPB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE IMR-90
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR843YYZ
released
Annotation file set
: Histone modifications annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR268PHG
released
Annotation file set
: Binding sites annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP