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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
DNase-seq
1
ChIP-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
111
monocyte
47
CD8-positive, alpha-beta T cell
30
endothelial cell
27
fibroblast
20
smooth muscle cell
19
CD14-positive monocyte
19
pericyte cell
18
macrophage
17
hepatocyte
15
CD4-positive, alpha-beta T cell
15
common myeloid progenitor, CD34-positive
14
B cell
13
astrocyte
13
endothelial cell of umbilical vein
13
foreskin fibroblast
13
mammary epithelial cell
13
pancreatic ductal cell
12
endothelial cell of hepatic sinusoid
12
excitatory neuron
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
osteoblast
11
erythroblast
11
keratinocyte
11
pancreatic beta cell
10
pancreatic acinar cell
10
pancreatic alpha cell
10
regulatory T cell
9
mature neutrophil
9
natural killer cell
9
skeletal muscle fiber
9
skeletal muscle satellite cell
8
T cell
8
glutamatergic neuron
8
neutrophil
8
pancreatic delta cell
8
skeletal muscle myoblast
7
cardiac muscle cell
7
fibroblast of lung
7
foreskin keratinocyte
7
mesenchymal stem cell
7
retinal pigment epithelial cell
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
T-cell
6
T-helper 1 cell
6
bronchial epithelial cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
memory B cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
trophoblast cell
5
cardiac fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive, alpha-beta memory T cell
5
alternatively activated macrophage
5
basal cell
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of villous mesenchyme
5
gabaergic neuron
5
inhibitory neuron
5
mast cell
5
myofibroblast cell
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
plasma cell
5
tracheal epithelial cell
4
CD1c-positive myeloid dendritic cell
4
T-helper 17 cell
4
T-helper 2 cell
4
acute myeloid leukemia cell
4
adipocyte
4
aortic adventitial fibroblast
4
blood vessel smooth muscle cell
4
cardiac fibroblast
4
choroid plexus epithelial cell
4
dermis blood vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
epithelial cell of proximal tubule
4
hepatic stellate cell
4
inflammatory macrophage
4
luminal epithelial cell of mammary gland
4
mammary gland epithelial cell
4
megakaryocyte
4
mesothelial cell
4
neurosphere
4
pancreatic polypeptide-secreting cell
4
preadipocyte
4
pulmonary artery endothelial cell
4
renal cortical epithelial cell
4
renal epithelial cell
4
smooth muscle cell of the esophagus
4
type I pneumocyte
3
CD4-positive helper T cell
3
Ishikawa
3
Th1 cell
3
Th17 cell
3
activated CD4-positive, alpha-beta T cell
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
bone marrow cell
3
brain pericyte
3
ciliated cell
3
club cell
3
endocardial cell
3
enteric neuron
3
epithelial cell of esophagus
3
epithelial cell of prostate
3
erythroid cell
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
foreskin melanocyte
3
glial cell
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
goblet cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
kidney tubule cell
3
leukocyte
3
mononuclear cell of bone marrow
3
myotube
3
naive t cell
3
neoplastic cell
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic stellate cell
3
parietal cell
3
peptic cell
3
peripheral blood stem cell
3
plasmacytoid dendritic cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
schwann cell
3
skeletal muscle cell
3
skin fibroblast
3
smooth muscle cell of the brain vasculature
3
thyroid follicular cell
3
type B pancreatic cell
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Muller cell
2
Rhabdoid Tumor of the Kidney
2
Schwann cell
2
T follicular helper cell
2
Th2 cell
2
activated CD8-positive, alpha-beta T cell
2
alveolar macrophage
2
basal cell of epidermis
2
brain microvascular endothelial cell
2
capillary endothelial cell
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
central memory CD8-positive, alpha-beta T cell
2
chronic lymphocytic leukemia cell
2
colon goblet cell
2
columnar chondrocyte
2
conventional dendritic cell
2
dermis microvascular lymphatic vessel endothelial cell
2
eccrine cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
erythroid progenitor cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of breast
2
fibroblast of peridontal ligament
2
foveolar cell of stomach
2
gamma-delta T cell
2
granular cell of epidermis
2
head and neck squamous cell carcinoma
2
intestinal tuft cell
2
iris pigment epithelial cell
2
leukemic stem cell
2
lung microvascular endothelial cell
2
luteal cell
2
mantle cell lymphoma cell
2
mature NK T cell
2
mature natural killer cell
2
melanocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
meso-epithelial cell
2
microglial cell
2
mononuclear cell
2
myoepithelial cell
2
myoepithelial cell of mammary gland
2
naive regulatory T cell
2
natural killer cell mediated cytotoxicity
2
neural cell
Organ
3
brain
3
connective tissue
Life stage
1
unknown
Date released
1
February, 2021
1
January, 2020
1
May, 2020
Software used
1
deltasvm
1
encode-ccres
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
Cycling Endothelial Cell
month_released!
September, 2022
Showing 3 of 3 results
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Download
FileSet
DSR838IVA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR646QPA
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain pericyte DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585ZLG
released
Annotation file set
: Accessible chromatin annotation of brain pericyte from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP