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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
candidate regulatory elements
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
2
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
22
stomach
20
breast cancer cell
20
heart
18
kidney
17
brain
17
lung
17
muscle of arm
15
large intestine
15
muscle of back
15
placenta
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
small intestine
13
left lung
13
muscle of leg
12
neuroblastoma cell
11
gastric cancer cell
11
hematopoietic multipotent progenitor cell
10
diffuse intrinsic pontine glioma
10
renal cortex interstitium
10
right lung
10
thymus
9
Rhabdomyosarcoma
9
cardiac muscle cell
9
foreskin keratinocyte
9
left kidney
9
liposarcoma
9
liver
9
mammary epithelial cell
9
renal pelvis
8
CD4-positive, alpha-beta T cell
8
MCF-7
8
T-cell acute lymphoblastic leukemia
8
esophageal adenocarcinoma
8
foreskin fibroblast
8
keratinocyte
8
neuronal stem cell
8
right kidney
8
spleen
7
B cell
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta T cell
7
fibroblast cell line
7
hESC cell
7
heart left ventricle
7
neuroblastoma cell line
7
spinal cord
6
Chondroid Chordoma
6
H9
6
acute myeloid leukemia
6
bronchial epithelial cell
6
melanoma
5
A549
5
CD4-positive, alpha-beta memory T cell
5
Ewing sarcoma
5
diffuse large B-cell lymphoma
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
esophageal squamous cell carcinoma
5
foreskin melanocyte
5
glioblastoma multiforme cancer stem cell
5
natural killer cell
5
neural progenitor cell
5
osteosarcoma
5
prostate cancer cell line
5
testis
4
22Rv1
4
CD14-positive monocyte
4
HEK293
4
HS-SY-2 cell
4
HepG2
4
Jurkat
4
LNCAP
4
Mantle cell lymphoma
4
Peyer's patch
4
RS4-11 cell
4
Rh-4 cell
4
T-cell
4
Th1 cell
4
Tumor-derived cell line
4
WI38
4
adipocyte
4
body of pancreas
4
chorionic villus
4
colon adenocarcinoma
4
dermal fibroblast
4
dermis blood vessel endothelial cell
4
endodermal cell
4
epithelial cell of prostate
4
erythroid progenitor cell
4
esophagus squamous epithelium
4
gastroesophageal sphincter
4
glioblastoma cell
4
glioma cell
4
immortal neural cell line cell
4
layer of hippocampus
4
left renal pelvis
4
lower leg skin
4
lymphoblastoid cell line
4
melanoma cell
4
mesenchymal stem cell
4
mesodermal cell
4
osteoblast
4
pancreas
4
right renal pelvis
4
sigmoid colon
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
4
upper lobe of left lung
3
B-lymphocyte
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
COLO205
3
GM06990
3
GM12864
3
GM12865
3
GM12873
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
Ishikawa
3
K562
3
LHCN-M2
3
MCF 10A
3
MG63
3
MM.1S
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RKO
3
RPMI8226
3
RWPE1
3
SK-N-DZ
3
SK-N-MC
3
SW480
3
T-helper 1 cell
3
WERI-Rb-1
3
breast epithelium
3
cardiac fibroblast
3
caudate nucleus
3
choroid plexus epithelial cell
3
chronic lymphocytic leukemia cell
3
colonic mucosa
3
dermis microvascular lymphatic vessel endothelial cell
3
endocrine pancreas
3
endothelial cell
3
epithelial ovarian cancer cell
3
esophagus muscularis mucosa
3
fibroblast
3
fibroblast of lung
3
fibroblast of mammary gland
3
gastrocnemius medialis
3
hematopoietic cell
3
hepatic stellate cell
3
hepatocyte
3
islet of Langerhans
3
left renal cortex interstitium
3
leukemic stem cell
3
lung fibroblast cell line
3
lymphoblast
3
mesendoderm
3
metastatic melanoma
3
mononuclear cell of bone marrow
3
trophoblast cell
2
143B
2
501A
2
697 cell
2
769-P cell
2
786-O cell
2
A-1847 cell
2
A-375 cell
2
A-498 cell
2
A-673 cell
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
AGS cell
2
ALL-SIL cell
2
Adipose stromal cell
2
AsPC-1 cell
2
B-cell lymphoma cell
2
BCBL-1 cell
2
BE(2)-C
2
BEAS-2B cell
2
BG03
2
BICR 31
2
BJ cell
2
BT-474 cell
2
BT-549 cell
Organ
3
epithelium
Life stage
2
unknown
Date released
16
November, 2021
6
February, 2024
6
September, 2022
5
February, 2021
5
May, 2021
3
May, 2024
2
January, 2021
2
May, 2022
1
August, 2021
1
May, 2020
1
October, 2022
Software used
3
macs
2
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR748FIG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE neutrophil
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR122XLC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE neutrophil
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR296FOQ
released
Annotation file set
: Histone modifications annotation for Cardiovascular Endothelial_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR406JQN
released
Annotation file set
: Binding sites annotation for Cardiovascular Primary_endothelial_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR388QAH
released
Annotation file set
: Binding sites annotation for Cardiovascular Endothelial_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP