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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ATAC-seq
2
ChIP-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
3
cell line
1
primary cell
Biosample term
19
endothelial cell of umbilical vein
19
ovary
18
coronary artery
17
tibial artery
16
testis
15
ascending aorta
12
aorta
12
endothelial cell of hepatic sinusoid
11
thoracic aorta
10
choroid plexus epithelial cell
10
dermis blood vessel endothelial cell
8
dermis lymphatic vessel endothelial cell
8
fibroblast of pulmonary artery
7
endothelial cell of lymphatic vessel
7
pulmonary artery endothelial cell
6
NT2-D1 cell
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
brain microvascular endothelial cell
5
lung microvascular endothelial cell
4
aortic endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
fibroblast of the aortic adventitia
4
kidney capillary endothelial cell
4
smooth muscle cell of the coronary artery
2
capillary endothelial cell
2
luteal cell
2
vascular associated smooth muscle cell
2
vein endothelial cell
1
brain microvascular endothelial cell
1
NT2/D1
1
aortic smooth muscle cell
1
cardiac fibroblast
1
circle of Willis
1
endothelial cell of coronary artery
1
placental villus capillary endothelial cell
1
somatic gonadal cell
Organ
4
artery
4
blood vessel
4
heart
4
vasculature
0
gonad
0
pericardium
Life stage
1
unknown
Date released
3
February, 2021
1
May, 2021
Software used
3
macs
1
abc
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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FileSet
DSR442EVO
released
Annotation file set
: Accessible chromatin of smooth muscle cell of the coronary artery from GSE113348 ATAC-seq cell lines
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR951OND
released
Annotation file set
: Histone modifications annotation for Cardiovascular HCASMC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR898IID
released
Annotation file set
: Binding sites annotation for Cardiovascular HCASMC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR886XYE
released
Annotation file set
: enhancer-gene predicton of coronary_artery_smooth_muscle_cell-Miller2016 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP