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Citing CMDGA
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Assay category
3
DNA binding
1
DNA accessibility
Assay
3
ChIP-seq
1
FAIRE-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Target of assay
3
transcription factor
1
RNA binding protein
Biosample type
3
cell line
1
primary cell
Organ
3
liver
1
blood vessel
1
epithelium
1
vasculature
1
vein
Life stage
3
child
1
newborn
Available data
3016
bigWig
2998
bam
1598
bed narrowPeak
1402
tsv
1008
fastq
963
bigBed narrowPeak
298
bed broadPeak
262
bigBed broadPeak
250
bed bed3+
238
tagAlign
22
hic
21
bedpe bed3+
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Platform
3
Illumina Genome Analyzer
Run type
3
single-ended
Read length (nt)
3
35
Library made from
4
DNA
Date released
3
November, 2017
1
October, 2019
Lab
4
AMP-T2D consortium
Replication type
4
isogenic
files.file_type!
bed bedMethyl
Showing 4 of 4 results
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Experiment
DSR024UHG
released
FAIRE-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR829588
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR665514
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
MYC
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR978069
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
POLR2A
Lab:
AMP-T2D consortium
Project:
AMP