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Schema
Citing CMDGA
Clear Filters
Assay category
4
DNA binding
Assay
4
ChIP-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Target of assay
2
histone
2
histone modification
2
transcription factor
1
broad histone mark
1
narrow histone mark
Biosample type
4
in vitro differentiated cells
Organ
2
connective tissue
Life stage
2
embryonic
2
unknown
Available data
4
bam
4
bed narrowPeak
4
bigWig
4
fastq
2
bed bed3+
Platform
2
Illumina Genome Analyzer IIx
1
HiSeq 1500
1
Illumina Genome Analyzer II
Run type
4
single-ended
Read length (nt)
126
101
78
36
74
100
54
76
52
51
45
75
29
50
27
43
14
102
8
41
7
49
6
33
6
35
4
40
4
44
4
61
3
32
3
200
2
37
2
70
1
20
1
38
1
67
1
125
1
140
Library made from
4
DNA
Date released
2
August, 2017
2
February, 2018
Lab
4
AMP-T2D consortium
Replication type
isogenic
2
anisogenic
2
unreplicated
Audit category:
3
inconsistent control read length
lab.title!
Kyle Gaulton, UCSD
replication_type!
isogenic
Showing 4 of 4 results
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Experiment
TSTSR275745
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR440619
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR659518
released
Audit warning
1
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
RELA
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR080417
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP