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Annotation type
3
eQTL
2
pQTL
Annotation Category
5
Genetic variant effects
Annotation type Category
3
RNA-seq
2
quantitative proteomics
Available data
1
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
4
cartilage tissue
1
synovial joint
Organ
4
connective tissue
Life stage
5
adult
Date released
5
August, 2021
Software used
2512
macs
1682
r
1000
chromhmm
838
encode-ccres
250
abc
120
deltasvm
32
cicero
27
chicago
27
nospecificsoft_customcode
24
gtex_eqtl:V8
24
gtex_finemapping_eQTL:caveman
24
gtex_finemapping_eQTL:caviar
24
gtex_finemapping_eQTL:dapg
18
samtools
14
hiccups
14
limix
12
deeptools
12
matrix-eQTL
12
umitools
8
fastqtl
7
deseq2
6
eigenmt
6
qTLtools
6
rasqual
5
peer
5
unknown
3
minfi
2
combined S2G strategy
2
emmax
2
mpraflow
2
sqtlseeker
1
bedops
1
bimbam
1
epacts
1
fast-lmm
1
haploview
1
pepatac
1
probabel
1
snap
1
spp
Lab
5
ITG
Project
5
ITG
RFA
5
ITG
month_released!
August, 2017
February, 2023
Showing 5 of 5 results
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Download
FileSet
DSR524ZAH
released
Annotation file set
: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR474VCE
released
Annotation file set
: eQTL of synovial tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR376WYD
released
Annotation file set
: eQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR276XRX
released
Annotation file set
: eQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG