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Annotation type
6
eQTL
Annotation Category
6
Genetic variant effects
Annotation type Category
6
RNA-seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
102
GRCh38
6
hg19
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
tissue
Biosample term
1
endothelial cell
1
mesenchymal stem cell
1
skeletal muscle tissue
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
3
musculature of body
1
connective tissue
1
epithelium
Life stage
1
adult
Date released
5
February, 2024
1
February, 2021
Software used
2537
macs
1682
r
1035
chromhmm
838
encode-ccres
250
abc
120
deltasvm
32
cicero
27
chicago
27
nospecificsoft_customcode
24
gtex_eqtl:V8
24
gtex_finemapping_eQTL:caveman
24
gtex_finemapping_eQTL:caviar
24
gtex_finemapping_eQTL:dapg
18
samtools
14
hiccups
14
limix
12
deeptools
12
matrix-eQTL
12
umitools
8
fastqtl
7
deseq2
6
eigenmt
6
qTLtools
6
rasqual
5
peer
5
unknown
3
minfi
2
combined S2G strategy
2
emmax
2
mpraflow
2
sqtlseeker
1
bedops
1
betacells_cytokines_t1d
1
bimbam
1
epacts
1
fast-lmm
1
haploview
1
pepatac
1
probabel
1
snap
1
spp
Lab
5
Stephen Parker, UMich
1
AMP-T2D consortium
Project
6
AMP
Collection Tags
6
T2DKP
6
DGA
RFA
5
AMP2
1
AMP
Showing 6 of 6 results
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Download
FileSet
DSR259PWV
released
Annotation file set
: Genetic regulators (quantitative trait loci; QTLs) of expression (eQTLs) of human skeletal muscle from FUSION study
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR829NMX
released
Annotation file set
: Expression QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR355IUU
released
Annotation file set
: Expression QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR727SYE
released
Annotation file set
: Expression QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR033HJN
released
Annotation file set
: Expression QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR876MNY
released
Annotation file set
: Expression QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP