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Assay category
3
DNA binding
1
DNA accessibility
1
DNA methylation
1
Transcription
Assay
3
ChIP-seq
1
DNase-seq
1
RRBS
1
total RNA-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
6
Homo sapiens
Target of assay
7
histone
histone modification
4
narrow histone mark
3
broad histone mark
2
control
1
RNA binding protein
1
transcription factor
Biosample type
6
primary cell
Organ
6
epithelium
6
kidney
Life stage
6
unknown
Available data
5
bam
3
bigWig
2
bed narrowPeak
2
bigBed narrowPeak
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
tsv
Library made from
6
DNA
Date released
3
June, 2019
2
July, 2019
1
October, 2019
Lab
6
AMP-T2D consortium
Replication type
3
isogenic
2
unreplicated
1
anisogenic
Audit category:
4
inconsistent ontology term
audit.ERROR.category!
audit script error
target.investigated_as!
histone modification
Showing 6 of 6 results
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Experiment
DSR738XEA
released
ChIP-seq
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR841OEU
released
total RNA-seq
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR682FAB
released
Audit error
1
RRBS
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR645FWC
released
Audit error
1
DNase-seq
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR926BDT
released
Audit error
1
ChIP-seq
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR625ZMF
released
Audit error
1
ChIP-seq
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP