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Assay category
2
Transcription
1
DNA binding
Assay
2
single cell RNA-seq
1
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Target of assay
1
control
Biosample type
3
primary cell
Organ
3
epithelium
3
pancreas
Life stage
1
adult
1
child
1
unknown
Available data
3
bam
3
fastq
2
bigWig
2
tsv
Platform
1
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2500
1
Illumina NextSeq 500
Run type
2
single-ended
1
paired-ended
Read length (nt)
1
36
1
75
1
100
Library insert size (nt)
1
>100
Library made from
2
RNA
1
DNA
Date released
July, 2018
2
April, 2018
1
August, 2017
Lab
3
AMP-T2D consortium
Replication type
unreplicated
2
anisogenic
1
isogenic
Audit category:
audit script error
audit.ERROR.category!
audit script error
month_released!
July, 2018
organ_slims!
bone element
replication_type!
unreplicated
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Experiment
TSTSR617554
released
single cell RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (38 years) and female adult (44 years) and male adult (21 year) and male adult (22 years) and male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR630704
released
single cell RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female child (19 months) and male child (2 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR295201
released
ChIP-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP