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Schema
Citing CMDGA
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Assay category
4
3D chromatin structure
Assay
4
Hi-C
Project
3
HPAP
1
AMP
RFA
3
HPAP
1
AMP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
10
tissue
7
in vitro differentiated cells
4
primary cell
2
cell line
Organ
4
epithelium
3
pancreas
1
blood vessel
1
vasculature
1
vein
Life stage
3
adult
1
unknown
Available data
613
bigWig
609
bam
409
fastq
295
bed narrowPeak
270
tsv
153
zippedFastqFolder
109
bigBed narrowPeak
100
tagAlign
49
bed broadPeak
49
bigBed broadPeak
37
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
1
bed bed3
1
tar
Library made from
4
DNA
Date released
3
October, 2022
1
March, 2020
Lab
3
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Replication type
4
anisogenic
Audit category:
3
audit script error
audit.ERROR.category!
inconsistent replicate
organ_slims!
skin of body
Showing 4 of 4 results
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Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR954WVM
released
Audit error
1
Hi-C
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR767WCG
released
Audit error
1
Hi-C
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP