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Schema
Citing CMDGA
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Assay category
3
DNA binding
Assay
3
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Biosample type
3
in vitro differentiated cells
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
23
connective tissue
21
epithelium
19
pancreas
18
ureter
13
liver
13
vasculature
11
blood vessel
4
artery
4
eye
3
embryo
2
adipose tissue
2
nerve
2
vein
1
spleen
Life stage
3
unknown
Available data
35
bam
29
bigWig
26
fastq
14
bed narrowPeak
14
tsv
3
bed bed3+
Platform
3
Illumina HiSeq 2500
Run type
3
single-ended
Read length (nt)
3
36
1
50
Library made from
3
DNA
Date released
3
December, 2017
Lab
3
AMP-T2D consortium
Replication type
3
isogenic
Audit category:
1
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
Showing 3 of 3 results
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Experiment
TSTSR642129
released
Audit warning
1
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR290464
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR537658
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP