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Getting started
Schema
Clear Filters
Annotation type
2638
pQTL
1709
candidate regulatory elements
1218
target gene predictions
939
chromatin state
899
accessible chromatin
863
histone modifications
817
binding sites
595
gene expression
484
differential activity
177
eQTL
141
variant allelic effects
74
Fine-mapped variants
25
caQTL
4
sQTL
4
variant to gene
2
other
1
representative DNase hypersensitivity sites
Annotation Category
5228
cis-regulatory elements
3063
Genetic variant effects
1218
Target gene links
1079
Gene expression levels
2
Others
Annotation type Category
5123
ChIP-seq
2925
DNase-seq
2638
quantitative proteomics
464
RNA-seq
460
snATAC-seq
350
ATAC-seq
305
single cell RNA-seq
189
HiC
133
scRNA-seq
84
snDropSeq
47
pCHi-C
25
snRNA-seq
17
Expression arrays
5
Capture-C
4
RNA microarray
1
SNP-SELEX
Available data
5799
bed bed3+
3463
tsv
864
bed bed9
533
bigWig
112
txt
35
bigBed bed9
34
bed bed9+
26
csv
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bam
3
bed gappedPeak
3
xls
File set status
10588
released
1
archived
1
revoked
Genome assembly (visualization)
6704
hg19
1824
GRCh38
4
hg18
Organism
10542
Homo sapiens
Biosample type
5256
tissue
2608
primary cell
2289
cell line
431
in vitro differentiated cells
4
stem cell
Biosample term
2636
whole blood
92
heart
84
stomach
81
kidney
73
brain
70
endothelial cell
68
lung
67
muscle of arm
63
HeLa-S3
62
small intestine
61
A549
60
adrenal gland
59
placenta
57
B cell
57
muscle of leg
55
large intestine
54
muscle of back
53
H1-hESC
53
common myeloid progenitor, CD34-positive
53
macrophage
52
left lung
51
neural progenitor cell
47
liver
47
thymus
46
smooth muscle cell
45
T cell
45
fibroblast
45
right lung
43
natural killer cell
42
hematopoietic multipotent progenitor cell
42
islet of Langerhans
42
right kidney
41
adipocyte
41
hepatocyte
40
K562
40
renal cortex interstitium
40
renal pelvis
40
retina
36
left kidney
34
cardiac muscle cell
34
heart left ventricle
34
spinal cord
32
CD4-positive, alpha-beta memory T cell
32
spleen
30
adipose tissue
29
pancreatic ductal cell
26
regulatory T cell
25
MCF-7
25
epithelial cell of proximal tubule
25
tibial nerve
24
pericyte cell
23
body of pancreas
23
neuron
22
CD8-positive, alpha-beta memory T cell
22
caudate nucleus
22
foreskin keratinocyte
22
sigmoid colon
21
T-helper 1 cell
21
glomerular endothelial cell
21
pancreas
20
breast cancer cell
20
keratinocyte
20
mononuclear cell
20
pigmented layer of retina
20
subcutaneous adipose tissue
20
trophoblast cell
19
T-helper 17 cell
19
coronary artery
19
endothelial cell of lymphatic vessel
19
heart right ventricle
19
ovary
19
psoas muscle
19
right atrium auricular region
18
HFFc6
18
astrocyte
18
endothelial cell of umbilical vein
18
foreskin fibroblast
18
mesenchymal stem cell
18
pericyte
18
substantia nigra
18
tibial artery
17
CD8-positive, alpha-beta T cell
17
gastrocnemius medialis
17
mast cell
17
omental fat pad
17
pancreatic beta cell
17
testis
17
thyroid gland
17
transverse colon
16
HepG2
16
chorionic villus
16
dendritic cell
16
endothelial cell of hepatic sinusoid
16
fibroblast of cardiac tissue
16
hepatic stellate cell
16
layer of hippocampus
16
monocyte
16
muscle of trunk
16
osteoblast
16
retinal pigment epithelial cell
16
skeletal muscle satellite cell
16
skeletal muscle tissue
15
CD14-positive monocyte
15
CD4-positive, alpha-beta T cell
15
T-helper 2 cell
15
ascending aorta
15
cerebellum
15
endocardial cell
15
fibroblast of lung
15
frontal cortex
15
induced pluripotent stem cell
15
mammary gland epithelial cell
15
pancreatic alpha cell
15
pancreatic delta cell
15
skeletal muscle myoblast
14
GM12878
14
endocrine pancreas
14
pancreatic acinar cell
14
prostate gland
14
putamen
14
upper lobe of left lung
13
H9
13
Peyer's patch
13
aorta
13
bronchial epithelial cell
13
excitatory neuron
13
neurosphere
13
temporal lobe
12
Ammon's horn
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
neuroblastoma cell
11
fibroblast of dermis
11
glomerular visceral epithelial cell
11
left cardiac atrium
11
left renal pelvis
11
mammary epithelial cell
11
neuronal stem cell
11
right renal pelvis
10
22Rv1
10
Rhabdomyosarcoma
10
breast epithelium
10
choroid plexus epithelial cell
10
epithelial cell of prostate
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
kidney tubule cell
10
lymphocyte
10
neutrophil
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
skin fibroblast
10
thoracic aorta
10
trophoblast
9
SK-N-DZ
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
erythroblast
9
esophagus
9
liposarcoma
9