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Annotation type
2
accessible chromatin
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
megakaryocyte
Organ
311
epithelium
143
kidney
78
connective tissue
44
vasculature
40
pancreas
25
blood vessel
19
intestine
12
lung
11
musculature of body
10
adrenal gland
10
heart
10
skin of body
9
lymphatic vessel
9
stomach
6
large intestine
6
mammary gland
5
artery
5
liver
4
esophagus
4
eye
4
small intestine
3
bone element
3
bone marrow
3
bronchus
3
extraembryonic component
2
embryo
2
gonad
2
ovary
2
placenta
2
thyroid gland
2
uterus
1
thymus
Date released
2
January, 2021
1
November, 2021
Software used
2
macs
1
cicero
Lab
2
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Project
AMP
2
T1D
1
ENCODE
Collection Tags
2
T1D
1
AMP
1
T2DKP
RFA
2
T1D
1
ENCODE3
award.project!
AMP
Showing 3 of 3 results
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Download
FileSet
DSR326TXQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Megakaryocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR213MXZ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D