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Annotation type
2
accessible chromatin
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
club cell
Organ
311
epithelium
143
kidney
78
connective tissue
44
vasculature
40
pancreas
25
blood vessel
19
intestine
12
lung
11
musculature of body
10
adrenal gland
10
heart
10
skin of body
9
lymphatic vessel
9
stomach
6
large intestine
6
mammary gland
5
artery
5
liver
4
esophagus
4
eye
4
small intestine
3
bone element
3
bone marrow
3
bronchus
3
extraembryonic component
2
embryo
2
gonad
2
ovary
2
placenta
2
thyroid gland
2
uterus
1
thymus
Date released
2
November, 2021
1
April, 2020
Software used
1
abc
1
macs
Lab
2
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
AMP
2
ENCODE
1
LungMap
Collection Tags
2
AMP
2
T2DKP
RFA
2
ENCODE3
1
LungMap2
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AMP
Showing 3 of 3 results
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Download
FileSet
DSR848VTY
released
Annotation file set
: ATAC-seq peaks in club cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR905LLL
released
Annotation file set
: Target gene predictions of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR678WWH
released
Annotation file set
: Accessible chromatin annotation of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE