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Annotation type
  • 2accessible chromatin
  • 2target gene predictions
Annotation Category
  • 2Target gene links
  • 2cis-regulatory elements
Annotation type Category
  • 2ATAC-seq
  • 2snATAC-seq
Available data
  • 4bed bed3+
  • 2bigWig
File set status
  • 4released
Genome assembly (visualization)
  • 4GRCh38
  • 4hg19
Organism
  • 4Homo sapiens
Biosample type
  • 4primary cell
Biosample term
  • 4smooth muscle cell of the esophagus
Organ
  • 311epithelium
  • 143kidney
  • 78connective tissue
  • 44vasculature
  • 40pancreas
  • 25blood vessel
  • 19intestine
  • 12lung
  • 11musculature of body
  • 10adrenal gland
  • 10heart
  • 10skin of body
  • 9lymphatic vessel
  • 9stomach
  • 6large intestine
  • 6mammary gland
  • 5artery
  • 5liver
  • 4esophagus
  • 4eye
  • 4small intestine
  • 3bone element
  • 3bone marrow
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  • 3extraembryonic component
  • 2embryo
  • 2gonad
  • 2ovary
  • 2placenta
  • 2thyroid gland
  • 2uterus
  • 1thymus
Date released
  • 4November, 2021
Software used
  • 2abc
  • 2macs
Lab
  • 4Bing Ren, UCSD
Project
  • AMP
  • 4ENCODE
Collection Tags
  • 4AMP
  • 4T2DKP
RFA
  • 4ENCODE3
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Showing 4 of 4 results

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  • FileSet

    DSR738CKV

    released

    Annotation file set: Target gene predictions of Smooth Muscle (Esophageal Muscularis) 2 from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR513MXE

    released

    Annotation file set: Target gene predictions of Smooth Muscle (Esophageal Muscularis) 1 from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR279PTE

    released

    Annotation file set: Accessible chromatin annotation of Smooth Muscle (Esophageal Muscularis) 2 from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR530GKX

    released

    Annotation file set: Accessible chromatin annotation of Smooth Muscle (Esophageal Muscularis) 1 from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
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