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Annotation type
1
gene expression
Annotation Category
1
Gene expression levels
Annotation type Category
1
scRNA-seq
Available data
1
tsv
1
txt
File set status
1
released
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
17
endothelial cell
15
CD14-positive monocyte
15
kidney
14
endothelial cell of hepatic sinusoid
13
adipocyte
13
hepatocyte
12
macrophage
11
fibroblast
11
pancreatic alpha cell
11
pancreatic beta cell
11
pancreatic delta cell
11
pancreatic ductal cell
10
pancreatic acinar cell
10
pituitary stalk
9
pancreatic stellate cell
9
smooth muscle cell
8
dendritic cell
8
induced pluripotent stem cell
8
natural killer cell
6
skeletal muscle fiber
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
B cell
5
CD4-positive helper T cell
5
CD8-positive, alpha-beta T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
left cardiac atrium
5
mesenchymal stem cell
5
myofibroblast cell
5
pancreatic endothelial cell
4
T cell
4
cartilage tissue
4
endothelial cell of lymphatic vessel
4
liver
4
mast cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic polypeptide-secreting cell
4
type I muscle cell
4
type II muscle cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
Schwann cell
3
basal cell
3
enterocyte
3
islet of Langerhans
3
keratinocyte
3
monocyte
3
neuronal stem cell
3
pancreatic quiescent stellate cell
3
pericyte cell
3
subcutaneous adipose tissue
2
BJAB cell
2
ESC derived cell line
2
EndoC_BH1
2
GM12878
2
H1-hESC
2
HepG2
2
Jurkat
2
K562
2
MCF 10A cell
2
T-cell
2
THP-1
2
U937
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
adrenal gland
2
articular chondrocyte
2
capillary endothelial cell
2
cardiac muscle cell
2
conventional dendritic cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
epithelial cell of esophagus
2
erythrocyte
2
extracellular matrix secreting cell
2
fibroblast of lung
2
glial cell
2
goblet cell
2
kidney distal convoluted tubule epithelial cell
2
leukocyte
2
mammary epithelial cell
2
megakaryocyte
2
memory B cell
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell mediated cytotoxicity
2
neural cell
2
non-classical monocyte
2
pancreatic A cell
2
plasmacytoid dendritic cell
2
regular ventricular cardiac myocyte
2
regulatory T cell
2
renal principal cell
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
stellate neuron
2
stomach
2
trophoblast cell
2
type B pancreatic cell
2
type II pneumocyte
2
vascular associated smooth muscle cell
1
A549
1
A673
1
B cell, CD19-positive
1
B-1 B cell
1
B-2 B cell
1
CD34-PB
1
CD56-positive, CD161-positive immature natural killer cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
IMR-90
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
Pancreatic islets
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
SK-N-SH
1
Satellite Cells, Skeletal Muscle
1
T-helper 17 cell
1
adipose tissue
1
alternatively activated macrophage
1
astrocyte
1
beige adipocyte
1
bipolar neuron
1
body of pancreas
1
breast epithelium
1
bronchial goblet cell
Organ
1
epithelium
1
kidney
Life stage
1
adult
Date released
1
August, 2021
Software used
1
r
1
seurat
Lab
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
1
AMP
RFA
1
AMP2
award.project!
ENCODE
biosample_term_name!
Cycling Epithelial Cell
lab.title!
AMP-T2D consortium
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Download
FileSet
DSR857ORD
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for glomerular endothelial cell
Lab:
Katalin Susztak, Upenn
Project:
AMP