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Getting started
Schema
Clear Filters
Annotation type
2
target gene predictions
1
accessible chromatin
Annotation Category
2
Target gene links
1
cis-regulatory elements
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
2636
whole blood
135
monocyte
110
heart
107
stomach
95
kidney
89
brain
86
head of caudate nucleus
84
muscle of arm
82
lung
82
placenta
77
adrenal gland
76
A549
76
small intestine
75
endothelial cell
75
fibroblast
71
CD8-positive, alpha-beta T cell
71
muscle of leg
70
large intestine
69
muscle of back
68
HeLa-S3
68
T-cell
67
left lung
66
common myeloid progenitor, CD34-positive
64
macrophage
63
B cell
62
CD4-positive, alpha-beta T cell
59
dorsolateral prefrontal cortex
58
smooth muscle cell
57
thymus
56
right lung
55
hematopoietic multipotent progenitor cell
55
stimulated activated CD4-positive, alpha-beta T cell
54
H1-hESC
52
neural progenitor cell
52
right kidney
51
natural killer cell
51
renal cortex interstitium
50
hepatocyte
50
liver
50
renal pelvis
48
K562
48
posterior cingulate gyrus
45
adipocyte
45
left kidney
44
heart left ventricle
44
islet of Langerhans
43
retina
41
T cell
41
spinal cord
39
CD14-positive monocyte
39
spleen
38
cardiac muscle cell
37
CD4-positive, alpha-beta memory T cell
34
pericyte
33
MCF-7
33
activated CD4-positive, alpha-beta T cell
32
T-helper 1 cell
31
adipose tissue
29
heart right ventricle
29
keratinocyte
29
ovary
28
T-helper 17 cell
28
body of pancreas
28
glutamatergic neuron
28
pancreas
28
pancreatic ductal cell
28
regulatory T cell
28
tibial nerve
28
trophoblast cell
27
naive thymus-derived CD4-positive, alpha-beta T cell
26
CD8-positive, alpha-beta memory T cell
26
T-helper 2 cell
26
epithelial cell of proximal tubule
25
psoas muscle
25
stimulated activated CD8-positive, alpha-beta memory T cell
24
dendritic cell
24
foreskin keratinocyte
24
gastrocnemius medialis
24
sigmoid colon
23
EndoC_BH1
23
H9
23
caudate nucleus
23
foreskin fibroblast
23
neuron
23
upper lobe of left lung
22
GABAergic neuron
22
HCT116
22
astrocyte
22
endothelial cell of umbilical vein
22
glomerular endothelial cell
22
thyroid gland
21
coronary artery
21
endothelial cell of lymphatic vessel
21
right atrium auricular region
21
testis
21
tibial artery
20
breast cancer cell
20
mesenchymal stem cell
20
mononuclear cell
20
naive thymus-derived CD8-positive, alpha-beta T cell
20
subcutaneous adipose tissue
20
transverse colon
19
HFFc6
19
HepG2
19
omental fat pad
18
ascending aorta
18
embryonic stem cell
18
hepatic stellate cell
18
muscle of trunk
18
pigmented layer of retina
17
Peyer's patch
17
fibroblast of lung
17
frontal cortex
16
GM12878
16
cerebellum
16
chorionic villus
16
endocardial cell
16
induced pluripotent stem cell
16
substantia nigra
15
activated T-cell
15
bronchial epithelial cell
15
mammary epithelial cell
15
mast cell
15
skeletal muscle myoblast
14
activated CD8-positive, alpha-beta memory T cell
14
aorta
14
endocrine pancreas
14
endothelial cell of hepatic sinusoid
14
layer of hippocampus
14
left renal cortex interstitium
14
mammary gland epithelial cell
14
osteoblast
14
pancreatic beta cell
14
retinal pigment epithelial cell
14
right renal pelvis
14
skeletal muscle tissue
13
breast epithelium
13
dermis blood vessel endothelial cell
13
fibroblast of cardiac tissue
13
fibroblast of dermis
13
glomerular visceral epithelial cell
13
left cardiac atrium
13
naive B cell
13
pancreatic alpha cell
13
prostate gland
13
putamen
12
Ammon's horn
12
SK-N-DZ
12
colonic mucosa
12
epithelial cell of prostate
12
left renal pelvis
12
lymphoblastoid cell line
11
IMR-90
11
SK-N-SH
11
choroid plexus epithelial cell
11
erythroblast
11
esophagus muscularis mucosa
11
kidney tubule cell
11
neuronal stem cell
11
neurosphere
11
neutrophil
11
pancreatic acinar cell
11
pancreatic delta cell
11
progenitor cell of endocrine pancreas
11
thoracic aorta
10
Rhabdomyosarcoma
10
endodermal cell
10
esophagus squamous epithelium
10
foreskin melanocyte
10
gastric cancer cell
10
limb
10
neuroblastoma cell
10
skeletal muscle satellite cell
9
22Rv1
9
GM06990
9
HAP-1
9
HT-29
9
PC-9
9
SK-N-MC
9
WERI-Rb-1
9
WI38
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
esophagus
9
eye
9
globus pallidus
9
lower leg skin
9
progenitor cell
9
temporal lobe
9
tongue
8
B Cell
8
GM12864
8
GM12865
8
HEK293
8
LNCaP clone FGC
8
MM.1S
8
NAMALWA cell
8
OCI-LY7
8
T47D
8
cingulate gyrus
Organ
2
thyroid gland
1
adrenal gland
Life stage
3
fetal
Date released
3
July, 2026
Lab
3
AMP-T2D consortium
Project
3
AMP
ENCODE
Collection Tags
3
HDMA
RFA
3
AMP
award.project!
ENCODE
Showing 3 of 3 results
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Download
FileSet
DSR896004
released
Annotation file set
: Accessible chromatin sites for Thyroid stromal (unclear markers but still has NKAIN3, P3H2 expression)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR005535
released
Annotation file set
: Target gene predictions for Thyroid stromal (unclear markers but still has NKAIN3, P3H2 expression)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR557705
released
Annotation file set
: Target gene predictions for Adrenal stromal (COL3A1+ TRPC6+; possibly mix of fibroblasts & pericytes; mix of all samples)
Lab:
AMP-T2D consortium
Project:
AMP