Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 41 results

FileSet
DSR451WRX
released
Annotation file set: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in macrophage
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR869XII
released
Annotation file set: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in macrophage
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR145GOE
released
Annotation file set: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in macrophage
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR366JDZ
released
Annotation file set: Accessible chromatin annotation of each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - macrophage
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR088PNU
released
Annotation file set: caQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - macrophage
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR375GZW
released
Annotation file set: eQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - macrophage
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR460NJI
released
Annotation file set: Candidate cis-Regulatory Elements (cCREs) of macrophage derived from liver snATAC-seq
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR231ITI
released
Annotation file set: Candidate cis-Regulatory Elements (cCREs) of macrophage derived from RV snATAC-seq
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR987KAF
released
Annotation file set: Candidate cis-Regulatory Elements (cCREs) of macrophage derived from LV snATAC-seq
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR868SOF
released
Annotation file set: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR101TON
released
Annotation file set: ATAC-seq peaks in macrophages from lung snATAC-seq
Lab: Xin Sun, UCSD
Project: LungMap
FileSet
DSR254KAF
released
Annotation file set: macrophage Salmonella eQTL of studay Nedelec_2016 from eQTL Catalogue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR348ZTM
released
Annotation file set: macrophage naive eQTL of studay Nedelec_2016 from eQTL Catalogue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR993EYM
released
Annotation file set: macrophage Listeria eQTL of studay Nedelec_2016 from eQTL Catalogue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR161ARS
released
Annotation file set: macrophage Salmonella eQTL of studay Alasoo_2018 from eQTL Catalogue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR036GKE
released
Annotation file set: macrophage naive eQTL of studay Alasoo_2018 from eQTL Catalogue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR880KQK
released
Annotation file set: macrophage IFNg+Salmonella eQTL of studay Alasoo_2018 from eQTL Catalogue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR711RVF
released
Annotation file set: macrophage IFNg eQTL of studay Alasoo_2018 from eQTL Catalogue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR689WCE
released
Annotation file set: Target gene predictions of Macrophage (General) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR874ZPI
released
Annotation file set: Accessible chromatin annotation of Macrophage (General) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR209GDO
released
Annotation file set: Accessible chromatin annotation of Fetal Placental Macrophage from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR550JNH
released
Annotation file set: Accessible chromatin annotation of Fetal Hepatic Macrophage 3 from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR450JSU
released
Annotation file set: Accessible chromatin annotation of Fetal Hepatic Macrophage 2 from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR794GWA
released
Annotation file set: Accessible chromatin annotation of Fetal Hepatic Macrophage 1 from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR620GTS
released
Annotation file set: Accessible chromatin annotation of Fetal Macrophage (General) 4 from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE