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Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
bed bed3+
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
0
tissue
Biosample term
28
islet of Langerhans
24
heart
23
kidney
21
brain
21
monocyte
21
stomach
18
lung
17
epithelial cell of proximal tubule
17
liver
16
adrenal gland
16
glomerular endothelial cell
16
muscle of arm
16
small intestine
15
muscle of leg
15
placenta
14
hepatocyte
14
subcutaneous adipose tissue
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
12
adipose tissue
12
regulatory T cell
11
T-helper 1 cell
11
T-helper 17 cell
11
right kidney
11
right lung
11
thymus
11
tibial nerve
10
B cell
10
body of pancreas
10
caudate nucleus
10
heart left ventricle
9
CD4-positive, alpha-beta memory T cell
9
cerebellum
9
coronary artery
9
endothelial cell
9
frontal cortex
9
left kidney
9
macrophage
9
omental fat pad
9
putamen
9
renal cortex interstitium
9
renal pelvis
9
right atrium auricular region
9
substantia nigra
9
tibial artery
8
ascending aorta
8
spinal cord
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
T-helper 2 cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mature neutrophil
7
pancreatic acinar cell
7
pancreatic ductal cell
6
Ammon's horn
6
T cell
6
amygdala
6
anterior cingulate cortex
6
glomerular visceral epithelial cell
6
heart right ventricle
6
hypothalamus
6
kidney interstitial cell
6
mononuclear cell
6
natural killer cell
6
neutrophil
6
nucleus accumbens
6
ovary
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
right lobe of liver
6
skeletal muscle tissue
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
alternatively activated macrophage
5
aorta
5
cerebellum (Hemisphere)
5
endothelial cell of umbilical vein
5
gastrocnemius medialis(Muscle - Skeletal)
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
mesangial cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
pancreatic stellate cell
5
retina
5
sigmoid colon
5
temporal lobe
5
testis
5
thyroid gland
5
transverse colon
4
CD14-positive monocyte
4
CD8-positive, alpha-beta T cell
4
angular gyrus
4
bone tissue
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
foreskin keratinocyte
4
gamma-delta T cell
4
gastrocnemius medialis
4
inflammatory macrophage
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
layer of hippocampus
4
muscle of trunk
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
psoas muscle
4
right cardiac atrium
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
skin of body
4
trophoblast cell
4
vagina
4
visceral abdominal adipose tissue
3
CD4-positive, alpha-beta T cell
3
Peyer's patch
3
S-shaped body
3
T follicular helper cell
3
adult endothelial progenitor cell
3
blood cell
3
cartilage tissue
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
effector memory CD8-positive, alpha-beta T cell
3
esophagus
3
esophagus muscularis mucosa
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
hepatic stellate cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
left renal cortex interstitium
3
mammary gland epithelial cell
3
memory B cell
3
naive B cel
3
naive T cell
3
neurosphere
3
osteoblast
3
pancreas
3
pancreatic quiescent stellate cell
3
prostate gland
3
right renal cortex interstitium
3
thoracic aorta
3
upper lobe of left lung
3
uterus
2
Brodmann (1909) area 46
2
Kupffer cell
2
articular chondrocyte
2
astrocyte
2
blood
2
breast epithelium
2
bronchial epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
dorsolateral prefrontal cortex
2
duodenal mucosa
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
epithelial cell of prostate
2
erythroblast
2
esophagus squamous epithelium
2
eye
2
fibroblast
2
fibroblast of breast
2
germinal matrix
2
globus pallidus
2
keratinocyte
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
left cardiac atrium
2
left renal pelvis
2
leukocyte
2
limb
2
lower leg skin
2
mature natural killer cell
2
medulla oblongata
2
memory T cell
2
memory regulatory T cell
Organ
1
epithelium
Life stage
1
unknown
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
award.project!
KPMP
files.file_type!
bed bed3+
Showing 1 of 1 results
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Download
FileSet
DSR561UII
released
Annotation file set
: Chromatin states for BSS01385 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP