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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
0
primary cell
Biosample term
126
monocyte
62
HeLa-S3
57
A549
51
H1-hESC
41
CD8-positive, alpha-beta T cell
40
common myeloid progenitor, CD34-positive
38
K562
35
B cell
30
endothelial cell
29
fibroblast
28
hepatocyte
28
macrophage
27
CD14-positive monocyte
27
CD4-positive, alpha-beta memory T cell
22
T cell
22
pericyte cell
22
regulatory T cell
21
CD8-positive, alpha-beta memory T cell
21
EndoC_BH1
20
T-helper 1 cell
20
smooth muscle cell
19
HFFc6
19
T-helper 17 cell
18
MCF-7
18
mononuclear cell
16
endothelial cell of hepatic sinusoid
15
T-helper 2 cell
15
astrocyte
15
endothelial cell of umbilical vein
14
fibroblast of cardiac tissue
14
natural killer cell
14
pancreatic acinar cell
14
pancreatic ductal cell
14
trophoblast cell
13
GM12878
13
HepG2
13
fibroblast of lung
13
keratinocyte
13
neutrophil
13
pancreatic beta cell
12
excitatory neuron
12
foreskin keratinocyte
12
mammary gland epithelial cell
12
pancreatic delta cell
12
skeletal muscle satellite cell
11
erythroblast
11
fibroblast of dermis
11
pancreatic alpha cell
11
skeletal muscle myoblast
10
H9
10
foreskin fibroblast
10
osteoblast
10
pituitary stalk
9
colon epithelial cell
9
endometrium adenocarcinoma
9
immortal human breast epithelial cell line cell
9
kidney tubule cell
9
lymphocyte
9
naive T cell
9
neurosphere
9
skeletal muscle fiber
8
SK-N-SH
8
epithelial cell of prostate
8
epithelial cell of proximal tubule
8
glomerular endothelial cell
8
glomerular visceral epithelial cell
8
glutamatergic neuron
8
induced pluripotent stem cell
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
skin fibroblast
7
CD4-positive, alpha-beta T cell
7
NAMALWA cell
7
SK-N-DZ
7
bronchial epithelial cell
7
choroid plexus epithelial cell
7
hepatic stellate cell
7
kidney glomerular epithelial cell
7
luminal epithelial cell of mammary gland
7
lymphoblastoid cell line
7
mature neutrophil
7
memory B cell
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
renal cortical epithelial cell
7
retinal pigment epithelial cell
7
type I muscle cell
6
22Rv1
6
GM19240
6
IMR-90
6
KARPAS-422 cell
6
LNCaP clone FGC
6
T47D
6
alternatively activated macrophage
6
cortical cell of adrenal gland
6
dermis blood vessel endothelial cell
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
fibroblast of breast
6
iPSC derived cell line
6
kidney epithelial cell
6
mesenchymal stem cell
6
myoepithelial cell of mammary gland
6
olfactory receptor cell
6
pancreatic stellate cell
5
cardiac fibroblast
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
BE(2)-C
5
BJ cell
5
CD14-positive, CD16-negative classical monocyte
5
Caco-2 cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
GM06990
5
GM12864
5
GM12865
5
GM18507
5
GM19238
5
GM19239
5
Glomerular Capillary Endothelial Cell
5
H7-hESC
5
HAP-1
5
HCT116
5
HEK293
5
HL-60
5
HT-29
5
HUES8
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
LoVo cell
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
MM.1S
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
NT2-D1 cell
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
OCI-LY7
5
PC-9
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
SK-N-MC
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
WERI-Rb-1
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
basal cell
5
cardiac muscle cell
5
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
epithelial cell of esophagus
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of villous mesenchyme
5
gabaergic neuron
Life stage
3
unknown
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
award.project!
T1D
month_released!
February, 2021
Showing 3 of 3 results
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Download
FileSet
DSR232CKP
released
Annotation file set
: Candidate regulatory elements for BSS00244 CWRU1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR195DVP
released
Annotation file set
: Target gene predictions for BSS00244 CWRU1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR040COK
released
Annotation file set
: Chromatin states for BSS00244 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP