Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 32 results

FileSet
DSR201DTC
released
Annotation file set: Candidate regulatory elements for BSS00556 hepatocyte from EpiMap
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR654OFJ
released
Annotation file set: Candidate regulatory elements for BSS00554 hepatocyte from EpiMap
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR926ULW
released
Annotation file set: Target gene predictions for BSS00556 hepatocyte from EpiMap
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR361WHM
released
Annotation file set: Target gene predictions for BSS00554 hepatocyte from EpiMap
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR642PKA
released
Annotation file set: Chromatin states for BSS00556 using the 18-state Roadmap model from EpiMap
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR607QDA
released
Annotation file set: Chromatin states for BSS00554 using the 18-state Roadmap model from EpiMap
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR943ZIF
released
Annotation file set: Target gene predictions of Hepatocyte from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR084ACR
released
Annotation file set: Accessible chromatin annotation of Hepatocyte from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR954EQS
released
Annotation file set: Histone modifications annotation of H3K4me3 ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR931ARL
released
Annotation file set: Histone modifications annotation of H3K4me1 ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR523PSZ
released
Annotation file set: Histone modifications annotation of H3K27ac ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR614AYG
released
Annotation file set: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin, 320µM palmitic acid and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR961YSK
released
Annotation file set: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR909IMA
released
Annotation file set: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin and 320µM palmitic acid (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR862SUJ
released
Annotation file set: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR683ANQ
released
Annotation file set: Accessible chromatin of primary hepatocytes in basal media with 0.1nM insulin (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR731RPD
released
Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE hepatocyte
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR272SHL
released
Annotation file set: Histone modifications annotation for Liver Hepatocytes from ChIP-atlas
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR687WXO
released
Annotation file set: Binding sites annotation for Liver Hepatocytes from ChIP-atlas
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR604IOP
released
Annotation file set: enhancer-gene predicton of hepatocyte-ENCODE from Broad ABC data
Lab: Jesse Engreitz, Stanford University
Project: AMP
FileSet
DSR471ZVP
released
Annotation file set: Gene expression levels (pseudobulks UMI) of liver Hep 6 from GSE115469 scRNA-seq
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR807YMV
released
Annotation file set: Gene expression levels (pseudobulks UMI) of liver Hep 1 from GSE115469 scRNA-seq
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR524MZQ
released
Annotation file set: Gene expression levels (pseudobulks UMI) of liver Hep 2 from GSE115469 scRNA-seq
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR198MXR
released
Annotation file set: Gene expression levels (pseudobulks UMI) of liver Hep 5 from GSE115469 scRNA-seq
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR179RJC
released
Annotation file set: Variant allelic effects annotation of Hepatocytes from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP