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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
108
monocyte
55
HeLa-S3
43
CD8-positive, alpha-beta T cell
43
H1-hESC
31
neural progenitor cell
30
kidney
29
retina
28
heart
27
stomach
23
K562
20
brain
20
breast cancer cell
20
pigmented layer of retina
19
CD14-positive monocyte
19
HFFc6
19
muscle of arm
18
adipocyte
18
adrenal gland
18
lung
17
large intestine
17
placenta
17
small intestine
16
hepatocyte
16
liver
16
muscle of leg
15
common myeloid progenitor, CD34-positive
15
islet of Langerhans
15
muscle of back
14
B cell
14
cardiac muscle cell
14
heart left ventricle
14
thymus
13
GM12878
13
H9
13
endothelial cell
13
left lung
13
pancreas
13
renal cortex interstitium
13
renal pelvis
13
spinal cord
13
spleen
12
EndoC_BH1
12
foreskin fibroblast
12
hematopoietic multipotent progenitor cell
12
mammary epithelial cell
12
neuroblastoma cell
12
retinal pigment epithelial cell
12
right lung
11
MCF-7
11
fibroblast
10
CD4-positive, alpha-beta T cell
10
HepG2
10
Rhabdomyosarcoma
10
embryonic stem cell
10
gastric cancer cell
10
keratinocyte
10
neuronal stem cell
10
osteoblast
9
diffuse intrinsic pontine glioma
9
endothelial cell of hepatic sinusoid
9
endothelial cell of umbilical vein
9
liposarcoma
9
macrophage
9
mesenchymal stem cell
9
right kidney
8
A549
8
B-lymphoblastoid cell line
8
coronary artery
8
fibroblast cell line
8
foreskin keratinocyte
8
pancreatic ductal cell
8
pituitary stalk
8
skeletal muscle myoblast
8
smooth muscle cell
7
Jurkat
7
T-cell acute lymphoblastic leukemia
7
esophageal adenocarcinoma
7
left cardiac atrium
6
Chondroid Chordoma
6
HEK293
6
HUES8
6
IMR-90
6
LNCAP
6
Rh-4 cell
6
SGBS preadipocytes
6
T-helper 1 cell
6
adipose tissue
6
bronchial epithelial cell
6
chondrocyte
6
fibroblast of lung
6
hESC cell
6
left kidney
6
lymphocyte
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
natural killer cell
6
neuroblastoma cell line
6
sigmoid colon
6
testis
6
tibial nerve
6
trophoblast cell
6
upper lobe of left lung
5
cardiac fibroblast
5
CD4-positive, alpha-beta memory T cell
5
CyT49
5
Ewing sarcoma
5
GM06990
5
GM12864
5
GM12865
5
GM19240
5
HAP-1
5
HCT-116 cell
5
HL-60
5
HT-29
5
MM.1S
5
OCI-LY7
5
PC-9
5
Peyer's patch
5
SK-N-MC
5
T cell
5
T-cell
5
U937
5
acute myeloid leukemia
5
choroid plexus epithelial cell
5
lymphoblastoid cell line
5
mesendoderm
5
osteosarcoma
5
ovary
5
prostate cancer cell line
5
regulatory T cell
5
smooth muscle cell of the coronary artery
5
tibial artery
4
22Rv1
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
Ammon's horn
4
B-lymphocyte
4
BE(2)-C
4
BJ cell
4
CD1c-positive myeloid dendritic cell
4
CD4-positive helper T cell
4
CMK
4
COLO205
4
Caco-2 cell
4
GM12873
4
GM12875
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
GM23248
4
HAC cell
4
HBMEC cell
4
HS-SY-2 cell
4
Ishikawa
4
KARPAS-422 cell
4
LHCN-M2
4
LoVo cell
4
MDA-MB-231 cell
4
MG63
4
Mantle cell lymphoma
4
NCCIT cell
4
NHEK
4
NT2-D1 cell
4
Normal Human Astrocytes
4
PANC-1 cell
4
PC-3
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
RKO
4
RPMI8226
4
RS4-11 cell
4
RWPE1
4
SK-N-DZ
4
SK-N-SH
4
SK-N-SH_RA
4
SW480
4
T-47D cell
4
T-helper 17 cell
4
Th1 cell
4
U2OS
4
WERI-Rb-1
4
acute myeloid leukemia cell
4
body of pancreas
4
caudate nucleus
4
diffuse large B-cell lymphoma
4
erythroid cell
4
esophageal squamous cell carcinoma
4
esophagus squamous epithelium
4
fibroblast of cardiac tissue
4
foreskin melanocyte
4
gastrocnemius medialis
4
heart right ventricle
4
hepatic stellate cell
4
left renal pelvis
4
mammary gland epithelial cell
4
psoas muscle
4
renal cortical epithelial cell
Organ
4
musculature of body
Life stage
1
adult
Date released
3
February, 2021
September, 2022
1
June, 2020
Software used
3
macs
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
September, 2022
Showing 4 of 4 results
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Download
FileSet
DSR004NTA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE LHCN-M2
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR837UGK
released
Annotation file set
: Histone modifications annotation for Muscle LHCN-M2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR864KBV
released
Annotation file set
: Binding sites annotation for Muscle LHCN-M2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR513VRE
released
Annotation file set
: Accessible chromatin annotation for Muscle LHCN-M2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP