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Schema
Citing CMDGA
Clear Filters
Annotation type
6
target gene predictions
1
gene expression
Annotation Category
6
Target gene links
1
Gene expression levels
Annotation type Category
6
ATAC-seq
6
DNase-seq
6
H3K27ac ChIP-Seq
1
scRNA-seq
Available data
6
bed bed3+
1
tsv
1
txt
File set status
7
released
Genome assembly (visualization)
6
hg19
Organism
7
Homo sapiens
Biosample type
6
in vitro differentiated cells
1
primary cell
Biosample term
118
monocyte
52
HeLa-S3
46
H1-hESC
35
CD8-positive, alpha-beta T cell
31
neural progenitor cell
19
HFFc6
17
K562
15
CD14-positive monocyte
15
EndoC_BH1
15
hepatocyte
14
endothelial cell of hepatic sinusoid
12
endothelial cell
12
islet of Langerhans
11
embryonic stem cell
10
pituitary stalk
9
extended pluripotent stem (EPS) cells
9
pancreatic ductal cell
9
progenitor cell of endocrine pancreas
8
adipocyte
8
kidney
8
liver
7
GM12878
7
H9
7
T-helper 1 cell
7
T-helper 17 cell
7
dendritic cell
7
regulatory T cell
6
fibroblast
6
left cardiac atrium
6
lymphocyte
6
macrophage
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
olfactory receptor cell
6
skeletal muscle fiber
6
smooth muscle cell
5
neutrophil
5
pancreatic acinar cell
4
B cell
4
CyT49
4
HUES8
4
Schwann cell
4
iPSC derived cell line
4
mesenchymal stem cell
4
subcutaneous adipose tissue
3
T-helper 2 cell
3
adipose tissue
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
enterocyte
3
hepatocyte(AFP)
3
memory B cell
3
myofibroblast cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic beta cell
3
pancreatic delta cell
3
pancreatic polypeptide-secreting cell
3
type I muscle cell
3
type II muscle cell
2
BJAB cell
2
CD4-positive helper T cell
2
HCT116
2
HepG2
2
Jurkat
2
MCF 10A cell
2
T cell
2
T follicular helper cell
2
T-cell
2
THP-1
2
U937
2
adipose-derived stem cell
2
adrenal gland
2
astrocyte
2
basal cell
2
blood
2
cardiac muscle cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
epithelial cell of esophagus
2
gamma-delta T cell
2
glial cell
2
goblet cell
2
keratinocyte
2
kidney distal convoluted tubule epithelial cell
2
large intestine
2
leukocyte
2
mast cell
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
natural killer cell
2
neural cell
2
pancreatic A cell
2
pancreatic alpha cell
2
pancreatic stellate cell
2
renal principal cell
2
skeletal muscle satellite cell
2
stomach
2
trophoblast cell
2
type B pancreatic cell
2
vascular associated smooth muscle cell
1
A549
1
A673
1
B cell, CD19-positive
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
H7-hESC
1
HAP-1
1
HCT-116 cell
1
HT-29
1
IMR-90
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
SK-N-SH
1
Satellite Cells, Skeletal Muscle
1
activated pancreatic stellate cell
1
alternatively activated macrophage
1
aorta
1
aorta wall
1
aortic valve
1
beige adipocyte
1
bipolar neuron
1
body of pancreas
1
breast epithelium
1
bronchial goblet cell
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac ventricle
1
cardiomyocytes (cardiac muscle cell)
1
central memory CD4-positive, alpha-beta T cell
1
cerebrospinal fluid
1
common myeloid progenitor, CD34-positive
1
coronary artery
1
cortical cell of adrenal gland
1
cytotoxic T cell
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
endothelial cell of umbilical vein
1
epithelial cell of prostate
1
epithelial cell of proximal tubule
1
erythroblast
1
excitatory neuron
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
gastrocnemius medialis
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulosa cell
1
heart
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
iPS DF 19.11
1
induced pluripotent stem cell
1
inflammatory macrophage
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lower motor neuron
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
Life stage
1
adult
Date released
6
May, 2021
1
August, 2021
1
May, 2024
0
February, 2024
Software used
6
abc
1
r
1
seurat
Lab
6
Jesse Engreitz, Stanford University
1
Katalin Susztak, Upenn
Project
7
AMP
RFA
6
AMP
1
AMP2
Showing 7 of 7 results
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Download
FileSet
DSR832FZL
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for dendritic cell
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR599YMO
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_6_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR694OVG
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_4_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR015NPU
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_30_minute-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR132FCP
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_2_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR549DHG
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_1_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR046SIQ
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_0_ng-mL_for_0_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP