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Citing CMDGA
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Embeddings type
2
Accessible chromatin
1
Gene expression
Embeddings Category
3
umap
Underlying Assay
1
10X snATAC-seq
1
10X snRNA-seq
1
sciATAC-seq
Available data
3
h5ad
1
mtx
1
tsv
File set status
3
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
lung
1
tissues
Tissue term
2
lung
1
tissues
Organ
2
lung
Date released
2
September, 2021
1
November, 2021
Lab
2
Xin Sun, UCSD
1
Bing Ren, UCSD
Project
2
LungMap
1
ENCODE
RFA
AMP
2
LungMap2
1
ENCODE3
award.rfa!
AMP
biosample_term_name!
spleen
organ_slims!
pancreas
tissue_term_name!
blood
Showing 3 of 3 results
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FileSet
DSR838CLG
released
Embeddings file set
: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR514DTZ
released
Embeddings file set
: snRNA-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR722OVR
released
Embeddings file set
: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap