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Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
Capture-C
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
15
kidney
7
induced pluripotent stem cell
4
cartilage tissue
2
EndoC_BH1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
purified protein and synthetic DNA oligo binding assay
1
synovial joint
1
undifferentiated ESC (H9 cell line)
Organ
1
brain
Date released
1
November, 2022
1
September, 2023
Software used
1
chicago
1
macs
Lab
2
Struan F.A. Grant, CHOP
Project
2
AMP
RFA
AMP
2
AMP2
award.rfa!
AMP
biosample_type!
primary cell
Showing 2 of 2 results
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FileSet
DSR383OMT
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Progenitor (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR455VRI
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP