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Clear Filters
Embeddings type
  • 3Accessible chromatin
  • 3Gene expression
Embeddings Category
  • 6umap
Underlying Assay
  • 210X snATAC-seq
  • 110X scRNA-seq
  • 110X snRNA-seq
  • 1sciATAC-seq
Available data
  • 3h5ad
  • 3mtx
  • 1rds
  • 1tsv
File set status
  • 6released
Organism
  • 3Homo sapiens
Biosample type
  • 7tissue
  • primary cell
Biosample term
  • 2islet of Langerhans
  • 2lung
  • 1heart
  • 1tissues
Tissue term
  • 2lung
  • 2pancreas
  • 1heart
  • 1tissues
Organ
  • 2lung
  • 2pancreas
  • 1heart
Date released
  • 2October, 2024
  • 2September, 2021
  • 1June, 2025
  • 1November, 2021
Lab
  • 2Franck Mauvais-Jarvis Lab
  • 2Xin Sun, UCSD
  • 1Bing Ren, UCSD
  • 1Kyle Gaulton, UCSD
Project
  • 2LungMap
  • 2community
  • 1AMP
  • 1ENCODE
RFA
  • AMP
  • 2LungMap2
  • 2community
  • 1AMP2
  • 1ENCODE3
award.rfa!
  • AMP
biosample_type!
  • primary cell

Showing 6 of 6 results

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  • FileSet

    DSR445357

    released

    Embeddings file set: Integrate object with UMAP and RNA counts for FNIH multiome, CAREHF multiome, DPT and HiC.
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR662TAR

    released

    Embeddings file set: Single nucleus ATAC-seq data in human pancreatic islets for 15 donor
    Lab: Franck Mauvais-Jarvis Lab
    Project: community
  • FileSet

    DSR867WVO

    released

    Embeddings file set: Single cell RNA-seq data in human pancreatic islets for 52 donors
    Lab: Franck Mauvais-Jarvis Lab
    Project: community
  • FileSet

    DSR838CLG

    released

    Embeddings file set: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR514DTZ

    released

    Embeddings file set: snRNA-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
    Lab: Xin Sun, UCSD
    Project: LungMap
  • FileSet

    DSR722OVR

    released

    Embeddings file set: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
    Lab: Xin Sun, UCSD
    Project: LungMap
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