Showing 5 of 5 results

• FileSet

  DSR291812

  released

  Embeddings file set: Single-nucleus chromatin accessibility profiles quantified at consensus peak summits, with UMAP embeddings generated using Scanpy. (150bp +/- of the consensus peak summit).

  Lab: Stephen Parker, UMich

  Project: AMP

• FileSet

  DSR662TAR

  released

  Embeddings file set: Single nucleus ATAC-seq data in human pancreatic islets for 15 donor

  Lab: Franck Mauvais-Jarvis Lab

  Project: community

• FileSet

  DSR838CLG

  released

  Embeddings file set: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues

  Lab: Bing Ren, UCSD

  Project: ENCODE

• FileSet

  DSR722OVR

  released

  Embeddings file set: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old

  Lab: Xin Sun, UCSD

  Project: LungMap

• FileSet

  DSR047LET

  released

  Embeddings file set: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets

  Lab: Kyle Gaulton, UCSD

  Project: T1D