Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema
Clear Filters
Embeddings type
  • 3Gene expression
  • 2Accessible chromatin
Embeddings Category
  • 5umap
Underlying Assay
  • 210X snATAC-seq
  • 110X scRNA-seq
  • 110X snRNA-seq
Available data
  • 5h5ad
  • mtx
  • 1rds
  • 1tsv
File set status
  • 5released
Organism
  • 4Homo sapiens
Biosample type
  • 5tissue
  • 2primary cell
Biosample term
  • 2islet of Langerhans
  • 2lung
  • 2pancreas
  • 2peripheral blood mononuclear cell
  • 1heart
Tissue term
  • 2blood
  • 2lung
  • 2pancreas
  • 1heart
Organ
  • 2blood
  • 2bodily fluid
  • 2lung
  • 2pancreas
  • 1heart
Date released
  • 2August, 2021
  • 2September, 2021
  • 1June, 2025
Lab
  • 3Kyle Gaulton, UCSD
  • 2Xin Sun, UCSD
Project
  • 2LungMap
  • 2T1D
  • 1AMP
RFA
  • AMP
  • 2LungMap2
  • 2T1D
  • 1AMP2
award.rfa!
  • AMP
files.file_type!
  • mtx

Showing 5 of 5 results

table-tab-iconmatrix-icon

  • FileSet

    DSR445357

    released

    Embeddings file set: Integrate object with UMAP and RNA counts for FNIH multiome, CAREHF multiome, DPT and HiC.
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR514DTZ

    released

    Embeddings file set: snRNA-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
    Lab: Xin Sun, UCSD
    Project: LungMap
  • FileSet

    DSR722OVR

    released

    Embeddings file set: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
    Lab: Xin Sun, UCSD
    Project: LungMap
  • FileSet

    DSR675TJW

    released

    Embeddings file set: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
    Lab: Kyle Gaulton, UCSD
    Project: T1D
  • FileSet

    DSR047LET

    released

    Embeddings file set: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
    Lab: Kyle Gaulton, UCSD
    Project: T1D
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego