Search – Common Metabolic Diseases Genome Atlas

Showing 9 of 9 results

FileSet
DSR291812
released
Embeddings file set: Single-nucleus chromatin accessibility profiles quantified at consensus peak summits, with UMAP embeddings generated using Scanpy. (150bp +/- of the consensus peak summit).
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR144369
released
Embeddings file set: Single-nucleus RNA-seq gene expression profiles after ambient RNA correction, with UMAP embeddings generated using Scanpy.
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR662TAR
released
Embeddings file set: Single nucleus ATAC-seq data in human pancreatic islets for 15 donor
Lab: Franck Mauvais-Jarvis Lab
Project: community
FileSet
DSR867WVO
released
Embeddings file set: Single cell RNA-seq data in human pancreatic islets for 52 donors
Lab: Franck Mauvais-Jarvis Lab
Project: community
FileSet
DSR838CLG
released
Embeddings file set: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR514DTZ
released
Embeddings file set: snRNA-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab: Xin Sun, UCSD
Project: LungMap
FileSet
DSR722OVR
released
Embeddings file set: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab: Xin Sun, UCSD
Project: LungMap
FileSet
DSR675TJW
released
Embeddings file set: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab: Kyle Gaulton, UCSD
Project: T1D
FileSet
DSR047LET
released
Embeddings file set: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab: Kyle Gaulton, UCSD
Project: T1D