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Annotation type
5
target gene predictions
Annotation Category
5
Target gene links
Annotation type Category
5
Capture-C
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
stem cell
Biosample term
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
undifferentiated ESC (H9 cell line)
Organ
3
brain
2
connective tissue
Date released
5
September, 2023
Software used
306
macs
215
r
111
abc
110
deseq2
28
cicero
25
seurat
12
deeptools
12
samtools
12
umitools
9
qTLtools
9
salmon
5
chicago
5
eigenmt
5
fastqtl
5
peer
5
rasqual
3
matrix-eQTL
1
bedops
1
betacells_cytokines_t1d
1
pepatac
Lab
5
Struan F.A. Grant, CHOP
Project
5
AMP
Collection Tags
5
AMP
RFA
AMP
5
AMP2
award.rfa!
AMP
Showing 5 of 5 results
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FileSet
DSR383OMT
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Progenitor (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR416XCR
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Neuron (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR841JDM
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of Human Mesenchymal Cell derived Osteoblasts (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR722BWL
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of Human Mesenchymal Cell derived Adipocytes (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP