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Annotation type
5
caQTL
Annotation Category
5
Genetic variant effects
Annotation type Category
5
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
1
endothelial cell
1
mesenchymal stem cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
1
connective tissue
1
epithelium
Date released
5
October, 2022
Software used
306
macs
215
r
111
abc
110
deseq2
28
cicero
25
seurat
12
deeptools
12
samtools
12
umitools
9
qTLtools
9
salmon
5
chicago
5
eigenmt
5
fastqtl
5
peer
5
rasqual
3
matrix-eQTL
1
bedops
1
betacells_cytokines_t1d
1
pepatac
Lab
5
Stephen Parker, UMich
Project
5
AMP
Collection Tags
5
T2DKP
5
DGA
RFA
AMP
5
AMP2
award.rfa!
AMP
Showing 5 of 5 results
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FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP