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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
6
tissue
1
cell line
1
primary cell
Biosample term
105
monocyte
31
CD8-positive, alpha-beta T cell
12
hepatocyte
10
endothelial cell of hepatic sinusoid
9
osteoblast
8
endothelial cell
7
mammary epithelial cell
7
pancreatic ductal cell
6
pancreatic beta cell
5
foreskin fibroblast
5
pancreatic alpha cell
5
regulatory T cell
5
tracheal epithelial cell
4
acute myeloid leukemia cell
4
aortic endothelial cell
4
bronchial epithelial cell
4
glutamatergic neuron
4
pancreatic delta cell
4
preadipocyte
4
retinal pigment epithelial cell
3
cardiac fibroblast
3
CD1c-positive myeloid dendritic cell
3
Ishikawa
3
Th1 cell
3
Th17 cell
3
aortic adventitial fibroblast
3
bone marrow cell
3
erythroid cell
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
hepatic stellate cell
3
keratinocyte
3
mononuclear cell of bone marrow
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neoplastic cell
3
pancreatic acinar cell
3
peripheral blood stem cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary artery endothelial cell
3
pulmonary interstitial fibroblast
3
renal epithelial cell
3
skeletal muscle myoblast
3
smooth muscle cell
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Rhabdoid Tumor of the Kidney
2
Th2 cell
2
astrocyte
2
cardiac muscle myoblast
2
chronic lymphocytic leukemia cell
2
columnar chondrocyte
2
endothelial cell of umbilical vein
2
erythroid progenitor cell
2
fibroblast
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
head and neck squamous cell carcinoma
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
leukemic stem cell
2
leukocyte
2
macrophage
2
mantle cell lymphoma cell
2
mast cell
2
mature neutrophil
2
mesenchymal stem cell
2
meso-epithelial cell
2
myotube
2
natural killer cell
2
neuronal stem cell
2
neutrophil
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
peripheral blood mononuclear cell
2
peripheral blood-derived erythroblast
2
plasma cell
2
primordial germ cell
2
prostate gland cancer cell
2
renal cortical epithelial cell
2
renal proximal tubule cell
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
small cell ovarian carcinoma cell
2
somatic muscle myotube
2
trophoblast cell
2
type I muscle cell
2
type II muscle cell
1
B-Lymphocytes
1
B-cell lymphoma cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-Positive T-Lymphocytes
1
Glioblastoma
1
Stromal Predominant Kidney Wilms Tumor
1
T cell
1
T-cell lymphoma cell
1
T-helper 1 cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
acute myeloid leukemia
1
adipocyte
1
alveolar cell type II
1
aortic smooth muscle cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
bone cell
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
colorectal cancer
1
conventional dendritic cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
fibroblast of peridontal ligament
1
gabaergic neuron
1
glial cell
1
granulocyte
1
head and neck neoplasia
1
induced T-regulatory cell
1
intestinal epithelial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary gland epithelial cell
1
megakaryocyte
1
memory B cell
1
meningioma cell
1
microglial cell/astrocyte
1
mononuclear cell
1
mycosis fungoides
1
myeloid leukocyte
1
myofibroblast cell
1
naive B cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neural cell
1
neural progenitor cell
1
neuron
1
neutrophil progenitor cell
1
non-classical monocyte
1
non-neuronal cell
1
non-pigmented ciliary epithelial cell
1
oligodendrocyte
1
pancreatic endocrine cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
peripheral blood
1
plasmacytoid dendritic cell
1
proximal tubule cells with injury markers
1
renal intercalated cell
1
renal principal cell
1
seminoma cell
1
skeletal muscle cell
1
skin fibroblast
1
smooth muscle cell of the brain vasculature
1
somatic gonadal cell
1
sperm
1
stellate neuron
1
umbilical vein endothelial cell
1
undifferentiated pleomorphic sarcoma
1
urinary bladder cancer cell
Organ
1
brain
1
connective tissue
Date released
1
January, 2020
Software used
1
deltasvm
1
encode-ccres
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
ENCODE3
award.rfa!
ENCODE3
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Download
FileSet
DSR585ZLG
released
Annotation file set
: Accessible chromatin annotation of brain pericyte from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP