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Citing CMDGA
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Embeddings type
2
Gene expression
1
Accessible chromatin
Embeddings Category
3
umap
Underlying Assay
2
10X snRNA-seq
1
10X snATAC-seq
Available data
39
h5ad
3
mtx
3
tsv
2
rds
File set status
3
released
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
2
skeletal muscle tissue
1
heart
Tissue term
2
skeletal muscle tissue
1
heart
Organ
2
musculature of body
1
heart
Life stage
1
adult
Date released
2
May, 2022
1
February, 2023
Software used
cellranger-atac
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
ENCODE3
award.rfa!
ENCODE3
software_used.software.name!
cellranger-atac
tissue_term_name!
mammary gland
Showing 3 of 3 results
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FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR493VFJ
released
Embeddings file set
: Clustering of snRNA-seq gene expression profiles from 27,605 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR384UWH
released
Embeddings file set
: Clustering of snATAC-seq accessible chromatin profiles from 4,926 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP