Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
35
fibroblast
32
adipose tissue
29
adipocyte
24
pericyte cell
21
subcutaneous adipose tissue
19
foreskin fibroblast
19
mesenchymal stem cell
18
omental fat pad
17
fibroblast of cardiac tissue
17
osteoblast
16
fibroblast of lung
12
fibroblast of dermis
12
hepatic stellate cell
12
skin fibroblast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
pancreatic stellate cell
7
GM23248
7
MG63
7
chondrocyte
7
mesangial cell
6
OCI-LY1
6
SJSA1
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
L1-S8
5
Mesangial Cell
5
OCI-LY3
5
cardiac fibroblast
5
cartilage tissue
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
4
HS-27A
4
HS-5
4
HT1080
4
KMS-11
4
L1-S8R
4
NCI-H929
4
U2OS
4
adult endothelial progenitor cell
4
bone tissue
4
brain pericyte
4
femur
4
fibroblast of gingiva
4
preadipocyte
4
stromal cell of bone marrow
4
visceral abdominal adipose tissue
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
arm bone
3
leg bone
3
mononuclear cell of bone marrow
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
adipose tissue derived mesenchymal stem cell
2
articular chondrocyte
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
megakaryocyte
2
stromal cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
bone cell
1
bone marrow cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
quiescent pancreatic stellate cell
1
white adipose cell
1
white adipose tissue
Organ
4
bone element
0
connective tissue
Life stage
3
unknown
Date released
3
September, 2022
1
June, 2020
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
award.rfa!
T1D
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR939MEF
released
Annotation file set
: Candidate regulatory elements for BSS01108 L1-S8R from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR694CYB
released
Annotation file set
: Target gene predictions for BSS01108 L1-S8R from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR922RQS
released
Annotation file set
: Chromatin states for BSS01108 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR564NEB
released
Annotation file set
: Accessible chromatin annotation for Blood L1-S8R from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP