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Schema
Citing CMDGA
Clear Filters
Annotation type
5
chromatin state
1
target gene predictions
Annotation Category
5
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
5
GRCh38
Organism
6
Homo sapiens
Biosample type
5
tissue
1
cell line
Biosample term
15
CD14-positive monocyte
10
pituitary stalk
9
adipocyte
9
pancreatic ductal cell
8
pancreatic acinar cell
7
pancreatic alpha cell
7
pancreatic beta cell
7
pancreatic delta cell
7
pancreatic stellate cell
6
dendritic cell
6
fibroblast
5
left cardiac atrium
5
pancreatic endothelial cell
4
liver
4
macrophage
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
3
Schwann cell
3
endothelial cell
3
enterocyte
3
islet of Langerhans
3
keratinocyte
3
myofibroblast cell
3
pancreatic quiescent stellate cell
3
subcutaneous adipose tissue
2
BJAB cell
2
CD4-positive helper T cell
2
CD8-positive, alpha-beta T cell
2
ESC derived cell line
2
GM12878
2
H1-hESC
2
HepG2
2
Jurkat
2
K562
2
MCF 10A cell
2
T cell
2
T-cell
2
THP-1
2
U937
2
adrenal gland
2
basal cell
2
cardiac muscle cell
2
endothelial cell of umbilical vein
2
epithelial cell of esophagus
2
fibroblast of lung
2
goblet cell
2
hepatocyte
2
mammary epithelial cell
2
pancreatic A cell
2
pancreatic polypeptide-secreting cell
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
smooth muscle cell
2
stomach
2
trophoblast cell
2
type B pancreatic cell
2
vascular associated smooth muscle cell
1
A549
1
A673
1
B cell
1
B cell, CD19-positive
1
CD34-PB
1
CD56-positive, CD161-positive immature natural killer cell
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
IMR-90
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
Pancreatic islets
1
SK-N-SH
1
Satellite Cells, Skeletal Muscle
1
adipose tissue
1
astrocyte
1
beige adipocyte
1
bipolar neuron
1
body of pancreas
1
breast epithelium
1
bronchial goblet cell
1
cardiac ventricle
1
caudate nucleus
1
cell
1
cingulate gyrus
1
colonic mucosa
1
common myeloid progenitor, CD34-positive
1
coronary artery
1
cortical cell of adrenal gland
1
duodenal mucosa
1
epithelial cell of prostate
1
erythroblast
1
fibroblast of arm
1
fibroblast of dermis
1
foreskin fibroblast
1
gastrocnemius medialis
1
granulosa cell
1
iPS DF 19.11
1
induced pluripotent stem cell
1
large intestine
1
layer of hippocampus
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
megakaryocyte-erythroid progenitor cell
1
mesenchymal stem cell
1
mesendoderm
1
mesothelial cell
1
mid-frontal lobe
1
monocyte
1
mucosa of rectum
1
muscle of leg
1
muscle of trunk
1
myotube
1
natural killer cell
1
neuronal stem cell
1
osteoblast
1
ovary
1
pancreas
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endocrine cell
1
pancreatic immune cell
1
parietal cell
1
peptic cell
1
placenta
1
psoas muscle
1
rectum smooth muscle tissue
1
sigmoid colon
1
skeletal muscle
1
small intestine
1
smooth muscle cell of the coronary artery
1
spinal cord
1
spleen
1
stomach smooth muscle
1
substantia nigra
1
temporal lobe
1
thymus
1
thyroid follicular cell
1
thyroid gland
1
tissue-resident macrophage
1
transverse colon
1
type II pneumocyte
1
uterus
1
white adipose tissue
Organ
5
heart
1
lung
Date released
5
February, 2024
1
May, 2021
Software used
5
chromhmm
1
abc
Lab
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
18
ENCODE3
6
AMP
1
LungMap2
lab.title!
AMP-T2D consortium
Showing 6 of 6 results
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Download
FileSet
DSR885XQV
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1623
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR322XKD
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1600
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR988BKL
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1294
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR778BXQ
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1221
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR283TWH
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1202
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR510YWQ
released
Annotation file set
: enhancer-gene predicton of A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP