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Schema
Citing CMDGA
Clear Filters
Annotation type
3
differential activity
3
gene expression
Annotation Category
6
Gene expression levels
Annotation type Category
5
scRNA-seq
1
RNA-seq
Available data
37
bed bed3+
13
bed bed9
6
tsv
4
bigWig
3
bigBed narrowPeak
2
bigBed bed9
1
bam
1
bed gappedPeak
1
xls
File set status
6
released
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
tissue
Biosample term
15
monocyte
14
epithelial cell of proximal tubule
12
glomerular endothelial cell
11
cardiomyocytes
11
islet of Langerhans
10
subcutaneous adipose tissue
9
EndoC_BH1
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
H1-hESC
8
pancreatic ductal cell
7
T-helper 1 cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
neural progenitor cell
7
regulatory T cell
6
T-helper 17 cell
6
body of pancreas
6
cerebellum
6
endothelial cell
6
frontal cortex
6
kidney interstitial cell
6
omental fat pad
6
right atrium auricular region
6
tibial nerve
5
Ammon's horn
5
C1 segment of cervical spinal cord
5
amygdala
5
anterior cingulate cortex
5
ascending aorta
5
caudate nucleus
5
cerebellum (Hemisphere)
5
coronary artery
5
gastrocnemius medialis(Muscle - Skeletal)
5
hypothalamus
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
nucleus accumbens
5
pancreatic acinar cell
5
pancreatic alpha cell
5
pancreatic beta cell
5
pancreatic delta cell
5
putamen
5
right lobe of liver
5
substantia nigra
5
tibial artery
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
gamma-delta T cell
4
glomerular visceral epithelial cell
4
hepatocyte
4
mesangial cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic stellate cell
3
S-shaped body
3
T-helper 2 cell
3
adipose tissue
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
heart
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic quiescent stellate cell
3
visceral abdominal adipose tissue
2
B cell
2
CD8-positive, alpha-beta T cell
2
Kupffer cell
2
T follicular helper cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
kidney inner medulla collecting duct intercalated cell
2
liver
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
osteoblast
2
renal vesicle
2
retina
2
vascular associated smooth muscle cell
1
B-1a B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Schwann cell
1
activated pancreatic stellate cell
1
adipocyte
1
adrenal gland
1
alpha-beta T cell
1
aorta
1
aorta wall
1
aortic valve
1
astrocyte
1
bladder
1
brain
1
breast - mammary tissue
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
colon - sigmoid
1
colon - transverse
1
cytotoxic T cell
1
diencephalon
1
dorsolateral prefrontal cortex
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
excitatory neuron
1
fallopian tube
1
heart left ventricle
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hepatic stellate cell
1
hippocampal neuron
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney - cortex
1
kidney - medulla
1
left cardiac atrium
1
leukocyte
1
lower motor neuron
1
lung
1
macrophage
1
mast cell
1
mature B cell
1
meso-epithelial cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
metanephros
1
minor salivary gland
1
mitral valve
1
myeloid dendritic cell
1
myocyte
1
naive B cell
1
naive regulatory T cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell
1
occipital lobe
1
ovary
1
pancreatic epsilon cell
1
pancreatic polypeptide-secreting cell
1
parietal lobe
1
pituitary
1
plasma cell
1
prostate
1
proximal tubule
1
pulmonary valve
1
quiescent pancreatic stellate cell
1
renal connecting tubule
1
right cardiac atrium
1
skeletal muscle
1
skeletal muscle tissue
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine - terminal Ileum
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
spleen
1
stem cell
1
stomach
1
temporal lobe
1
testis
1
thyroid
1
tricuspid valve
1
ureteric bud
1
uterus
1
vagina
1
whole blood
Organ
5
epithelium
5
pancreas
1
brain
Life stage
1
adult
1
fetal
Date released
4
March, 2023
1
February, 2020
1
May, 2021
Software used
6
r
Lab
4
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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Download
FileSet
DSR705TXK
released
Annotation file set
: Differential activity within alpha in T2D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR989AJM
released
Annotation file set
: Differential activity within alpha in T1D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR363YSE
released
Annotation file set
: Differential activity within alpha in T1D Aab+
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR397MTF
released
Annotation file set
: Gene expression annotation of pancreatic alpha from single-cell transcriptome analysis
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR542DMU
released
Annotation file set
: GSE84133 Gene expression levels (pseudobulks UMI) of pancreatic alpha cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR783EQK
released
Annotation file set
: Gene expression levels of Brain temporal lobe from RNA-seq (ENCODE) fetal
Lab:
AMP-T2D consortium
Project:
AMP