Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
chromatin state
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
ChIP-seq
Available data
2
bed bed3+
2
bigWig
1
bed bed9
1
bigBed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
in vitro differentiated cells
Biosample term
2
heart left ventricle
2
pancreatic beta cell
1
adipocyte
1
ascending aorta
1
cardiac precursors
1
mesenchymal stem cell
1
pancreas
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic ductal cell
1
skeletal muscle satellite cell
1
thoracic aorta
Organ
1
blood vessel
1
connective tissue
1
pancreas
1
vasculature
Life stage
2
adult
Date released
18
September, 2022
12
February, 2021
5
August, 2017
5
May, 2021
3
June, 2020
3
October, 2019
2
February, 2024
2
January, 2020
2
March, 2020
2
May, 2020
1
January, 2022
1
November, 2019
1
November, 2022
Software used
2
macs
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR874TCD
released
Annotation file set
: Body of pancreas accessible chromatin annotation of overlapping ATAC-seq sites from 4 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR645XXX
released
Annotation file set
: Adipocyte accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR649MVO
released
Annotation file set
: ChromHMM 18-state model for Thoracic Aorta from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP