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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
15
kidney
14
endothelial cell of hepatic sinusoid
12
endothelial cell
11
hepatocyte
7
smooth muscle cell
5
fibroblast
5
macrophage
4
adipocyte
4
mesenchymal stem cell
4
natural killer cell
4
skeletal muscle fiber
4
type I muscle cell
4
type II muscle cell
3
B cell
3
endothelial cell of lymphatic vessel
3
mast cell
2
dendritic cell
2
endocardial cell
2
glial cell
2
kidney distal convoluted tubule epithelial cell
2
leukocyte
2
neural cell
2
neuronal stem cell
2
pericyte cell
2
regular ventricular cardiac myocyte
2
renal principal cell
2
skeletal muscle satellite cell
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
T-helper 17 cell
1
alternatively activated macrophage
1
cholangiocyte
1
effector CD8-positive, alpha-beta T cell
1
embryonic stem cell
1
epithelial cell of proximal tubule
1
erythrocyte
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
myofibroblast cell
1
neuron cell of Hypothalamus (neuron)
1
proximal tubule cells with injury markers
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal intercalated cell
1
undifferentiated ESC (H9 cell line)
Disease term
2
heart failure
1
liver disease
Organ
5
connective tissue
Life stage
5
adult
Date released
3
May, 2024
2
May, 2022
Software used
2
macs
Lab
3
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
Project
5
AMP
RFA
49
AMP
18
ENCODE3
5
AMP2
Showing 5 of 5 results
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Download
FileSet
DSR064ENS
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of fibroblast derived from liver snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR912ZCS
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of fibroblast derived from RV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR245GWZ
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of fibroblast derived from LV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR548JZG
released
Annotation file set
: Accessible chromatin annotation of Fibroblast(sub-type 2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR988BGT
released
Annotation file set
: Accessible chromatin annotation of Fibroblast(sub-type 1) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP