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Getting started
Schema
Clear Filters
Annotation type
2
accessible chromatin
2
candidate regulatory elements
1
caQTL
1
gene expression
Annotation Category
4
cis-regulatory elements
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
4
snATAC-seq
1
ATAC-seq
1
snRNA-seq
Available data
3
bed bed3+
1
bed bed3
1
bed narrowPeak
1
tsv
File set status
6
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
6
Homo sapiens
Biosample type
6
primary cell
Biosample term
15
endothelial cell
15
kidney
14
endothelial cell of hepatic sinusoid
11
hepatocyte
10
smooth muscle cell
8
macrophage
6
adipocyte
5
fibroblast
5
skeletal muscle satellite cell
4
mesenchymal stem cell
4
natural killer cell
4
neural cell
4
skeletal muscle fiber
4
type I muscle cell
4
type II muscle cell
3
B cell
3
T cell
3
endothelial cell of lymphatic vessel
3
fibro-adipogenic progenitor cell
3
mast cell
3
neuromuscular junction nucleus
3
type 1 muscle cell
3
type 2a muscle cell
3
type 2x muscle cell
2
dendritic cell
2
endocardial cell
2
glial cell
2
kidney distal convoluted tubule epithelial cell
2
leukocyte
2
neuronal stem cell
2
pericyte cell
2
regular ventricular cardiac myocyte
2
renal principal cell
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T-helper 17 cell
1
alternatively activated macrophage
1
effector CD8-positive, alpha-beta T cell
1
embryonic stem cell
1
epithelial cell of proximal tubule
1
erythrocyte
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
myofibroblast cell
1
neuron cell of Hypothalamus (neuron)
1
proximal tubule cells with injury markers
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal intercalated cell
1
undifferentiated ESC (H9 cell line)
Organ
6
connective tissue
Life stage
4
adult
Date released
2
February, 2024
2
July, 2025
2
May, 2024
Software used
2
macs
1
deeptools
1
qTLtools
1
r
1
samtools
1
umitools
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
Lab
4
Stephen Parker, UMich
2
Kyle Gaulton, UCSD
Project
6
AMP
Collection Tags
2
T2DKP
2
DGA
2
FNIH_projects-heart
RFA
24
AMP
6
AMP2
1
ENCODE3
Showing 6 of 6 results
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Download
FileSet
DSR614ZVC
released
Annotation file set
: Accessible chromatin annotation of each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - adipocyte
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR458YMM
released
Annotation file set
: caQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - adipocyte
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR095UPL
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of adipocyte derived from RV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR542XFW
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of adipocyte derived from LV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR083CQX
released
Annotation file set
: Cell type chromatin broad peaks and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP