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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
scRNA-seq
Available data
1
tsv
1
txt
File set status
2
released
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
11
endothelial cell
10
endothelial cell of hepatic sinusoid
8
kidney
7
smooth muscle cell
5
fibroblast
5
macrophage
4
adipocyte
4
mesenchymal stem cell
4
natural killer cell
4
skeletal muscle fiber
4
type I muscle cell
4
type II muscle cell
3
B cell
3
endothelial cell of lymphatic vessel
3
mast cell
2
dendritic cell
2
endocardial cell
2
glial cell
2
leukocyte
2
neural cell
2
neuronal stem cell
2
pericyte cell
2
regular ventricular cardiac myocyte
2
skeletal muscle satellite cell
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
T-helper 17 cell
1
alternatively activated macrophage
1
cholangiocyte
1
effector CD8-positive, alpha-beta T cell
1
embryonic stem cell
1
epithelial cell of proximal tubule
1
erythrocyte
1
glomerular endothelial cell
1
hepatic stellate cell
1
hepatocyte
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
myofibroblast cell
1
neuron cell of Hypothalamus (neuron)
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal principal cell
1
undifferentiated ESC (H9 cell line)
Organ
1
epithelium
1
kidney
Life stage
1
adult
Date released
1
August, 2021
1
November, 2022
Software used
1
macs
1
r
1
seurat
Lab
1
Katalin Susztak, Upenn
1
Struan F.A. Grant, CHOP
Project
2
AMP
RFA
30
AMP
2
AMP2
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FileSet
DSR455VRI
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR387PGT
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for kidney connecting tubule epithelial cell
Lab:
Katalin Susztak, Upenn
Project:
AMP