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Citing CMDGA
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Annotation type
1
chromatin state
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
RNA-seq
Available data
bed bed3+
1
bed bed9
1
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
primary cell
Biosample term
1
NCI-H226 cell
1
regulatory T cell
Disease term
57
chronic kidney disease
56
acute kidney failure
55
Acute kidney failure, unspecified
55
Chronic kidney disease (CKD)
18
lung epithelial-myoepithelial carcinoma
8
Philadelphia-positive myelogenous leukemia
6
large-cell immunoblastic lymphoma
5
breast cancer
5
colorectal adenocarcinoma
5
coronary artery disease
5
neuroblastoma
4
prostate adenocarcinoma
3
acute lymphoblastic leukemia
3
cervical adenocarcinoma
3
endometrium adenocarcinoma
3
glioblastoma
3
hepatocellular carcinoma
3
parathyroid gland clear cell adenoma
2
Burkitt lymphoma
2
acute promyelocytic leukemia
2
breast ductal adenocarcinoma
2
melanoma
2
osteosarcoma
2
plasma cell myeloma
2
renal cell adenocarcinoma
2
squamous cell carcinoma
1
Ewing sarcoma
1
adenoid cystic carcinoma
1
chronic kidney disease, hypertensive disorder
1
clear cell renal carcinoma
1
colon carcinoma
1
colorectal cancer
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
fibrosarcoma
1
glioma
1
heart failure
1
hypertensive disorder
1
lung adenocarcinoma
1
lung large cell carcinoma
1
metastatic melanoma
1
pancreatic adenocarcinoma
1
pancreatic ductal adenocarcinoma
1
prostate cancer
1
prostate carcinoma
1
retinoblastoma
1
small cell lung carcinoma
1
testicular embryonal carcinoma
1
type 2 diabetes mellitus
Organ
1
lung
Life stage
2
adult
Date released
1
February, 2024
1
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
Cycling Mononuclear Phagocyte
files.file_type!
bed bed3+
month_released!
November, 2022
Showing 2 of 2 results
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Download
FileSet
DSR379SBY
released
Annotation file set
: Chromatin states for BSS01359 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR877XBM
released
Annotation file set
: Gene expression annotation for RNA-seq of PRJEB11844 for regulatory T cell from NSCLC Squamous Cell Carcinoma
Lab:
AMP-T2D consortium
Project:
AMP