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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
megakaryocyte
Organ
459
epithelium
173
kidney
133
connective tissue
115
pancreas
71
vasculature
47
blood vessel
43
liver
36
musculature of body
32
intestine
20
brain
20
heart
18
lung
17
skin of body
14
large intestine
14
stomach
13
adrenal gland
12
lymphatic vessel
10
mammary gland
10
pituitary gland
8
embryo
7
artery
6
adipose tissue
6
blood
6
bodily fluid
6
esophagus
6
extraembryonic component
6
small intestine
4
bronchus
4
eye
4
thyroid gland
4
uterus
3
bone element
3
bone marrow
3
gonad
3
limb
3
ovary
3
placenta
3
prostate gland
2
thymus
2
vein
1
breast
1
lymph node
1
penis
1
spinal cord
1
spleen
Date released
2
January, 2021
1
November, 2021
Software used
2
macs
1
cicero
Lab
AMP-T2D consortium
2
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Project
2
T1D
1
ENCODE
RFA
2
T1D
1
ENCODE3
biosample_term_name!
Degenerative Distal Convoluted Tubule Cell
limb
lab.title!
AMP-T2D consortium
Showing 3 of 3 results
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Download
FileSet
DSR326TXQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Megakaryocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR213MXZ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D