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Citing CMDGA
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Annotation type
3
chromatin state
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
3
ChIP-seq
1
RNA-seq
Available data
bed bed3+
3
bed bed9
1
tsv
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
2
tissue
1
cell line
1
primary cell
Biosample term
2
parathyroid adenoma
1
PC-3
1
regulatory T cell
Disease term
57
chronic kidney disease
56
acute kidney failure
54
Acute kidney failure, unspecified
54
Chronic kidney disease (CKD)
18
lung epithelial-myoepithelial carcinoma
8
Philadelphia-positive myelogenous leukemia
6
large-cell immunoblastic lymphoma
5
breast cancer
5
colorectal adenocarcinoma
5
coronary artery disease
5
neuroblastoma
4
prostate adenocarcinoma
3
acute lymphoblastic leukemia
3
cervical adenocarcinoma
3
endometrium adenocarcinoma
3
glioblastoma
3
hepatocellular carcinoma
3
parathyroid gland clear cell adenoma
2
Burkitt lymphoma
2
acute promyelocytic leukemia
2
breast ductal adenocarcinoma
2
melanoma
2
osteosarcoma
2
plasma cell myeloma
2
renal cell adenocarcinoma
2
squamous cell carcinoma
1
Ewing sarcoma
1
adenoid cystic carcinoma
1
chronic kidney disease, hypertensive disorder
1
clear cell renal carcinoma
1
colon carcinoma
1
colorectal cancer
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
fibrosarcoma
1
glioma
1
heart failure
1
hypertensive disorder
1
lung adenocarcinoma
1
lung large cell carcinoma
1
metastatic melanoma
1
pancreatic adenocarcinoma
1
pancreatic ductal adenocarcinoma
1
prostate cancer
1
prostate carcinoma
1
retinoblastoma
1
small cell lung carcinoma
1
testicular embryonal carcinoma
1
type 2 diabetes mellitus
Organ
1
prostate gland
Life stage
4
adult
Date released
3
September, 2022
1
February, 2024
Software used
3
chromhmm
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
Glomerular Capillary Endothelial Cell
files.file_type!
bed bed3+
Showing 4 of 4 results
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FileSet
DSR205VRK
released
Annotation file set
: Chromatin states for BSS01414 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585RAO
released
Annotation file set
: Chromatin states for BSS01412 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR737CBP
released
Annotation file set
: Chromatin states for BSS01411 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR656SZK
released
Annotation file set
: Gene expression annotation for RNA-seq of PRJEB11844 for regulatory T cell from CRC Adenocarcinoma
Lab:
AMP-T2D consortium
Project:
AMP