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Citing CMDGA
Clear Filters
Annotation type
4
eQTL
Annotation Category
4
Genetic variant effects
Annotation type Category
4
RNA-seq
Available data
3
tsv
File set status
4
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
2
articular chondrocyte
1
retina
1
skeletal muscle tissue
Organ
2
connective tissue
1
eye
1
musculature of body
Life stage
4
adult
Date released
2
May, 2024
1
February, 2020
1
February, 2021
Software used
1136
r
385
chromhmm
316
encode-ccres
232
macs
115
deseq2
25
seurat
24
gtex_eqtl:V8
24
gtex_finemapping_eQTL:caveman
24
gtex_finemapping_eQTL:caviar
24
gtex_finemapping_eQTL:dapg
19
deltasvm
15
limix
9
salmon
8
hiccups
7
fastqtl
7
matrix-eQTL
5
peer
4
cicero
4
qTLtools
3
chicago
3
mach2qtl
3
minfi
3
sqtlseeker
3
unknown
2
emmax
1
epacts
1
fast-lmm
1
haploview
1
probabel
1
snap
Lab
2
AMP-T2D consortium
2
Doug Phanstiel, UNC
Project
2
AMP
2
community
RFA
2
AMP
2
community
biosample_term_name!
HepG2
Showing 4 of 4 results
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Download
FileSet
DSR602VGF
released
Annotation file set
: eQTL of primary articular chondrocytes treated with fibronectin fragment (FN-f) from 101 donors
Lab:
Doug Phanstiel, UNC
Project:
community
FileSet
DSR932ZJL
released
Annotation file set
: eQTL of primary articular chondrocytes treated with PBS from 101 donors
Lab:
Doug Phanstiel, UNC
Project:
community
FileSet
DSR259PWV
released
Annotation file set
: Genetic regulators (quantitative trait loci; QTLs) of expression (eQTLs) of human skeletal muscle from FUSION study
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR010VOR
released
Annotation file set
: cis-eQTL of eye from EyeGEx
Lab:
AMP-T2D consortium
Project:
AMP