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Embeddings type
2
Accessible chromatin
2
Gene expression
Cohort
1
HPAP
Embeddings Category
4
umap
Underlying Assay
1
10X scATAC-seq
1
10X scRNA-seq
1
10X snATAC-seq
Available data
h5ad
6
mtx
4
rds
4
tsv
File set status
4
released
Organism
2
Homo sapiens
Biosample type
4
tissue
Biosample term
3
islet of Langerhans
carotid canal
1
heart
Tissue term
3
pancreas
1
heart
Organ
3
pancreas
1
heart
Date released
2
October, 2024
1
June, 2025
1
March, 2024
Lab
2
Franck Mauvais-Jarvis Lab
2
Kyle Gaulton, UCSD
Project
2
AMP
2
community
RFA
2
community
1
AMP
1
AMP2
biosample_term_name!
carotid canal
files.file_type!
h5ad
Showing 4 of 4 results
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FileSet
DSR445357
released
Embeddings file set
: Integrate object with UMAP and RNA counts for FNIH multiome, CAREHF multiome, DPT and HiC.
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR662TAR
released
Embeddings file set
: Single nucleus ATAC-seq data in human pancreatic islets for 15 donor
Lab:
Franck Mauvais-Jarvis Lab
Project:
community
FileSet
DSR867WVO
released
Embeddings file set
: Single cell RNA-seq data in human pancreatic islets for 52 donors
Lab:
Franck Mauvais-Jarvis Lab
Project:
community
FileSet
DSR827MAZ
released
Embeddings file set
: Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP