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Citing CMDGA
Clear Filters
Annotation type
4
target gene predictions
Annotation Category
4
Target gene links
Annotation type Category
4
pCHi-C
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
tissue
2
cell line
2
in vitro differentiated cells
stem cell
Biosample term
1
B-lymphoblastoid cell line
1
embryonic stem cell
1
fibroblast cell line
1
neural progenitor cell
Date released
4
March, 2020
Software used
2232
macs
1354
r
523
chromhmm
360
encode-ccres
222
abc
117
deseq2
88
deltasvm
52
qTLtools
32
cicero
25
seurat
24
chicago
18
samtools
15
limix
12
deeptools
12
umitools
9
rasqual
9
salmon
6
hiccups
5
eigenmt
4
nospecificsoft_customcode
3
minfi
3
sqtlseeker
2
matrix-eQTL
2
mpraflow
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
cisgenome
1
e-range
1
pepatac
1
unknown
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
cartilage tissue
biosample_type!
stem cell
tissue
Showing 4 of 4 results
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Download
FileSet
DSR727XIO
released
Annotation file set
: A target gene prediction annotation in Human Neural Prgenitor Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR362JPD
released
Annotation file set
: A target gene prediction annotation in Human Fibroblasts of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR929DUM
released
Annotation file set
: A target gene prediction annotation in Human Human ES Cells of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR870IAS
released
Annotation file set
: A target gene prediction annotation in Human Lymphoblasts of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP